Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID82141 Trichostatin-a GSE92742 HA1E Human 24h 10uM EID0493
Types Number Response transcription factors
Up-regulation 217 ZNF586; SOX4; TGFB1; GATA2; NCOA3; RUNX3; PAXBP1; ADRB2; MYCBP; TCEA2; ZNF419; SETD3; ZNF432; POU4F2; ZNF331; BTAF1; ZNF813; SND1; ARID5A; SPIB; ZNF350; ZNF274; CEBPZ; SSX1; CREG1; ZNF304; TCFL5; ZNF266; EZH2; MED20; ECD; STAT3; GCM1; HBP1; ARID4A; ZNF257; NR2C1; PFDN5; JUN; TRIM24; NFATC3; ZNF254; JUND; CRK; BACH2; RCOR1; ZBTB11; HABP4; ZNF34; MNX1; NR0B1; ZNF695; CERS6; MAFG; SUMO1; IL16; SNIP1; TP63; KLF12; ID2; TTF1; NR1I3; HSF2; ZNF493; HMG20B; IKBKAP; NHLH2; DNMT3B; ZNF268; MYEF2; SPEN; ZBTB48; ZNF551; SCAI; NR0B2; WWC1; ZNF226; ZNF654; NKX2-2; INSR; TCEB2; GTF3A; MSX1; ZNF10; EP300; HDAC5; ARID3A; ZNF195; NR1I2; CBFA2T2; TBP; ZKSCAN5; NFE2; FOXO4; SNAPC4; UBE2B; NFIL3; CHD7; TWIST1; NPAT; SFMBT1; ZSCAN18; JUNB; MYT1; ZNF45; TAF1D; TCF3; PRDM2; MECP2; ZNF3; PPARGC1A; MYBBP1A; RNF141; TAF10; BLM; NR5A2; L3MBTL1; ZNF273; ATF7IP; ZNF14; STAT2; TDRD3; CTNNB1; TAF4B; ZNF211; ORC2; ZNF606; SIX2; RHOA; TAF11; RUVBL2; POU4F1; NR4A1; ZNF329; ZNF665; ZBTB24; KLF11; CTR9; ARNT; NANOG; FOXN3; ZNF134; BCL11B; NR1H4; PEX14; LYL1; EDF1; AEBP1; ZNF212; OSR2; ZNF544; ZNF93; BCOR; MDM4; ZNF85; ZNF667; RSF1; NRBF2; KDM5D; CCNC; SAP130; CCNE1; NOC2L; NR1H3; MGA; CREM; STAT1; ZNF232; ZNF117; PAX5; EGR1; ZNF415; ETV5; TRPS1; ZNF394; PHIP; SMARCD3; CRYM; MXI1; MYB; ATF2; BMI1; ZNF43; KLF2; HLF; IRF4; ZNF573; HIC2; SATB2; JARID2; INSM1; PMS1; IRF7; CUX2; CDK9; REL; DLX2; ZKSCAN1; KLF10; DLX5; ERBB4; ZNF410; ZNF165; ZNF589; HHEX; ST18; SOX11; HDAC9; HEY1; HEY2; ZBTB16; PPARD; ATF3; IRF6; FOXO3; TOX3; NR3C1
Down-regulation 220 XBP1; SMAD3; ATF6; PAX8; HOXA5; ZBTB38; FHL2; WT1; MED13; IFI16; CREB3L1; TP53; HIF1A; HOXA10; NR2F2; FOXJ2; TSC22D3; GABPB1; STAT6; HNRNPD; APEX1; CREB1; CEBPA; TULP3; HDGF; HOXB2; KLF9; NFE2L2; ERBB2; BCLAF1; BNC2; PHF2; CHAF1B; MYBL1; DEK; FOXF1; ZNF148; PMF1; ATF5; CENPF; DAXX; USP21; PTTG1; HOXB7; MBD3; SFPQ; FOXM1; VEZF1; MITF; ZFP36L1; CHD9; POU2AF1; SMARCC2; KDM5C; PBX1; NFKB1; VGLL4; TBL1X; HOXA7; HOXA3; ZFPM2; ZEB1; ATN1; MBD2; NFIX; HOXB5; PTRF; WDR77; ZBTB7A; TRIM32; CDX1; ZZZ3; ING3; ESR1; ZFHX3; PPRC1; TGIF1; CREBL2; WHSC1; NFE2L1; PRDM1; NR2F6; YAP1; HMG20A; GMEB1; SP2; ZBED1; WWTR1; ELF4; MSC; CCNA2; TFCP2L1; YWHAB; BARX1; PAX6; TAF4; ZFP64; NR1D2; LOXL2; ZFHX4; TFDP1; UBE3A; ZNF652; MKL2; USP22; CCDC59; NCOA2; ELF1; TSC22D2; TRIM16; ABT1; CREB3; PURA; SUPT3H; MEIS2; MEOX1; PCGF1; NFYB; THAP11; RBFOX2; PCBD1; MED1; TADA3; CSDE1; HOXB6; BATF3; HIPK1; CBX5; REPIN1; YBX3; LHX3; ARNTL2; MED16; TCF4; ZMYM2; SREBF2; ZNF516; HIRA; CUX1; RBM14; KAT2B; MTF2; BBX; CBFB; PIR; TRIM22; TRIP6; BCL6; TRIM27; POLR2A; REST; RFX5; RB1; TCF21; ING2; CCNH; ETV6; BPTF; RNF6; SP140L; SAP30; MECOM; NCOR2; SOX17; RBBP7; TGFB1I1; MEOX2; TLE4; PKNOX2; RAN; CTBP1; FOXJ1; MNAT1; ERF; ZFX; ATF1; SP100; BAZ1A; HOXA11; ETS2; ARL2BP; CTBP2; BRD2; SCMH1; CCNT1; HMGN3; FOXE1; CHD8; ADNP; MTA1; PEG3; KLF4; ABL1; ZMYND8; AHR; IRX5; HMGB1; LEF1; GLI2; ZMIZ1; MAGED1; SUB1; PBX3; SUV39H1; GATA6; AES; FOXD1; SNAI2; TXNIP; ZHX2; BHLHE40; HMGB2; EED; BASP1; TRIM29; ELK3; CEBPD; FOSL1; SPDEF; E2F2