Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID82106 Vorinostat GSE92742 HA1E Human 24h 10uM EID0493
Types Number Response transcription factors
Up-regulation 185 SOX4; ADRB2; ETV1; NCOA3; RUNX3; HDAC1; SPEN; NR0B1; TFDP1; SSX1; SMARCD3; NR2F1; EGR1; MNX1; TCEA2; ARID5A; SNIP1; MED20; EGR3; CREG1; SND1; JUN; SETD3; GTF2A2; MYCBP; ZNF274; STAT3; NR4A3; NR4A1; EGR2; MYOD1; HMG20B; CBX6; ZNF331; PFDN5; CREM; NR0B2; ECD; WHSC1L1; JUND; IRF4; SSX3; TTF1; POU2F2; CRY1; MYT1; VDR; HABP4; DLX4; BACH2; CTR9; PEG3; WWC1; TRPS1; MAFB; TRIM24; ARID3A; MXD1; NEDD8; SHOX2; RFXANK; ZNF45; MED1; HDAC3; OSR2; ZFHX4; ZNF266; ZNF556; INSR; ENY2; TAF11; CCNE1; ZNF467; RHOA; HBP1; IKBKAP; ZBED2; ARNTL; IRF5; AIP; CBX4; ZKSCAN5; HTATIP2; PPARGC1A; RFX5; MTF2; NAB2; ASH2L; SIX1; E2F6; PRDM2; HSF2; BATF; FOSB; ZIC1; THRAP3; HHEX; HCFC2; NKRF; ERCC3; ELF3; NOC2L; ATF3; BCL3; CREB3L2; ASCL1; SIRT2; ZMIZ2; NFYA; IRF3; ARNT; ZNF205; BRD4; CD3D; RNF141; SIX2; HLX; WNT4; IRF8; RBPJ; BLM; MAFF; CHD4; ETV5; HOXC4; MLXIP; POU4F1; PCGF2; RSF1; AEBP1; RBBP7; IL16; ILF2; PLAGL1; TWIST1; NFE2L3; HIC2; BATF3; ZNF654; ZNF211; TRRAP; HOXB13; ITGB3BP; NFIL3; MDM2; NFATC1; NCOR2; SPIB; HDAC9; ZFPM2; REL; EYA1; NFKBIB; EED; CRYM; STAT1; AHR; CBFA2T3; OLIG2; SIN3B; SOX10; PLAGL2; CERS6; NR4A2; TLE2; JARID2; TRIM29; ZKSCAN1; JUNB; TBL1X; FOXD1; NKX2-1; HOXC6; RUNX1; FOXO3; RB1; TOB1; NFAT5; PIR; IRF6; TOX3; KDM5D; PITX1; FOSL1; NFKB2
Down-regulation 190 SMAD3; FOXJ3; BIRC2; ATF5; TP53; MYBL1; NFE2L1; FHL2; STAT6; TSC22D3; ZBTB38; NR2F6; PHF20; ZEB1; ZNF623; FOXM1; PAX8; BRCA2; BRD3; TCEA1; DMTF1; PBX1; FOXF1; HIF1A; TGFB1I1; UBE2I; NFKBIA; KLF5; CREB3L1; BCLAF1; ERBB2; CEBPG; CHD9; CAPN15; ZNF264; CEBPB; APEX1; SALL1; PATZ1; E2F8; TSC22D2; TAF9; ZFP36L2; NFKB1; MEIS1; HOXA3; ZBTB3; PTRF; RBL1; ZMYND8; ZNF219; CTCF; DEK; TULP4; HDGF; ATF4; HMG20A; BRCA1; BAZ2B; CSDE1; HR; MED13; ZNF587; WDR77; SFPQ; FHL5; CENPB; PRKDC; TDP2; BTF3; ID3; ZNF551; KAT2B; SMAD1; ZNF112; ZNF593; PRMT2; ZHX2; THAP4; ZMYM2; ARL2BP; IRF1; TRIM22; SOX17; VEZF1; ZBTB7A; YAP1; SCAND1; PPRC1; NR1H2; PSMC3; UBE3A; ZNF22; KLF3; WHSC1; CBFB; ZNF12; DAXX; BTG1; E2F5; VGLL4; WT1; WWP1; RBM39; MBD2; BAZ1A; ZNF576; RXRG; EMX2; SNAI2; ID4; MED16; ZNF217; NR1I2; ADNP; HMGB1; HIPK1; TRIM27; RCOR3; TULP3; SMAD7; SMAD4; SMARCA2; TXNIP; ZZZ3; TGIF2; TBX3; TEAD4; ZNF292; SP140L; REPIN1; BBX; CNBP; ID1; LOXL2; ING3; SMARCC2; E2F3; CEBPA; ZFP64; SCMH1; ARID4B; BHLHE41; BASP1; ZBTB1; HOXB2; RREB1; PHIP; CBX5; TRIM16; ZNF146; EN1; TBL1XR1; NR1D2; ZNF124; CREB3; ZNF573; PNRC1; PITX2; PAX6; ZFP36L1; THAP11; ZNF91; SUV39H1; SAP30; DACH1; HES1; HIVEP1; IFI16; WWTR1; HIRA; NR3C2; BACH1; TRIB3; MECOM; HOXB7; NRIP1; ZNF532; TAL1; KLF2; ATF1; ESR1; HOXB6; ZBTB20; SOX11; ZNF423; ZMIZ1; E2F2; NR3C1; CEBPD