Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81951 Entinostat GSE92742 HA1E Human 24h 3.32999992371uM EID0497
Types Number Response transcription factors
Up-regulation 291 MEF2C; RELB; TWIST1; RNF6; TAF1; IKBKAP; SUV39H1; RFXANK; PBXIP1; ARID5A; HOXC4; CNOT6; SNAPC4; JUNB; IRF4; MLLT10; VDR; HOXC5; GATA6; HOXC6; SIX3; VGLL4; SAP18; BCLAF1; SOHLH2; TFAP4; FEV; ZNF74; TFAP2A; RAX; PRDM1; NFKBIB; IL16; ZNF671; BMI1; ZSCAN32; ETV1; TFEB; ZNF446; TCF4; ZNF222; MYB; KLF2; DDX54; TULP4; DYRK1B; ZNF227; ARID3B; PIAS4; E4F1; ZNF768; TCF15; ZMYND11; NR4A1; ZNF180; CASZ1; VGLL1; ARL2BP; HEY2; PRRX2; ZBED2; CDX1; BAZ2A; HIC2; ECD; HOXB1; HOXC13; BHLHE41; ZNF79; TAF6L; SIRT2; ZNF510; OVOL1; ZNF556; YBX2; NR6A1; ABT1; ZNF557; PIR; HMX1; FOSB; PQBP1; CCNT1; MLXIPL; TERF1; PRRX1; ZNF586; UBE2B; USP16; DNAJC1; ZNF410; HOXC10; TDRD3; ZBTB7B; MDFI; ZNF593; SIX1; EHMT1; IKZF1; ZBTB24; ZNF668; KMT2D; PPP1R13L; RNF14; ZBTB25; HIRA; GTF2F1; TCEA2; CIZ1; BCL3; MNX1; EMX1; ZNF219; HOXC8; TAF9; NPM1; THAP7; CHAF1B; MTF2; BATF; CBX2; TCF20; HMGB1; NR4A3; MED27; ZNF430; HOXA4; PAX6; EVX1; MED14; ZNF350; PAX7; SOX15; NR1D2; RRN3; AIRE; SSX1; ZNF665; ZNF205; ZNF394; HABP4; HEYL; CDC5L; SIX2; TP73; FOXE1; TFAM; DMRT1; RUNX1; BCL11B; TTF1; ZNF177; ZKSCAN1; REXO4; MSC; PRDM4; ZNF134; NFE2; CREM; TRIM32; BRD7; HSF4; ETV5; JARID2; PITX3; KDM5C; ZNF14; ST18; CRTC1; MED6; GATA1; YEATS4; HDAC7; BNC2; KLF11; ZFPM2; PHOX2A; ING3; ZNF136; ZBTB43; TGS1; ZSCAN18; AIP; TDP2; PIAS1; CEBPE; TCF3; ZNF574; HSF2; ZNF692; PAX8; SMARCC2; NKX2-2; NFE2L2; KLF6; SFMBT1; NUP62; SP100; SUPT5H; PRDM12; CDK9; MYOG; CREB1; CSDE1; TSG101; CDIP1; HOXB6; CERS6; ATF3; HMGN3; ZNF200; DEAF1; ID2; FOXO1; AEBP1; IRF5; FOXN3; KLF4; ADRB2; BASP1; BLM; MED15; PCGF1; ELK3; WWC1; CRY1; TLE2; SNW1; FOXC1; SPIB; HOXD11; TGIF1; IRF9; RELA; HIPK1; ZHX2; EWSR1; CEBPG; HIVEP2; FOXJ1; RBPMS; PFDN5; ENY2; FOXD1; URI1; CAPN15; ZNF160; CITED1; DACH1; MAX; OVOL2; HOXD1; TRPS1; RAD21; EDF1; UBE3A; EED; RERE; STAT5B; HDAC1; BHLHE40; ZNF281; PSMC3; ETV4; PHIP; CITED2; HLX; ZNF165; HLF; ZBTB16; EYA2; LEF1; ZNF512B; PTRF; ZNF721; CCNC; ZNF22; WT1; MECOM; AFF1; DMTF1; NR4A2; NKX2-1; HOXB5; SMAD7; KLF9; MNAT1; JUP; NR2F6; ZEB2; HOXB7
Down-regulation 232 PSIP1; ATF5; SMAD3; CEBPB; CNBP; MYCBP; HES1; CTBP1; IRF3; ENO1; ZNF83; SUZ12; YBX1; GLI2; RAN; ARID4B; SATB2; CCNA2; ARID5B; BPTF; ID3; CHD9; CREB3; PBX1; TP53; POU5F1B; CHD4; NCOR2; HMGB3; ATF6; ZNF217; ERBB2; DEK; HDGF; DDX17; FOXF1; ZBTB7A; ARNT2; ZIC3; MSX1; CHD8; TADA3; CREB5; ZNF107; SUPT4H1; NFATC4; ZNF589; IRX5; CUX1; ZNF573; PEG3; PNRC1; PIAS3; TEAD3; ZNF131; RUVBL2; BCL6; ARHGAP35; PKNOX2; USP21; WWTR1; ZNF292; AGO2; TBL1X; MMS19; RNF10; SIX6; SREBF1; MED13; ZFP36L1; NCOA3; MTF1; FOXK2; TAF10; ID4; EN1; SNIP1; EP300; ID1; ITGB3BP; ZSCAN9; SMAD1; ZNF440; TOX3; TULP3; PTTG1; RNF111; FEZF2; SOX12; USP22; HMGA1; ZNF248; APBB1; HOXA10; BRD4; GTF2IRD1; ASCL1; ATF2; HDAC5; TAF4; CBX4; PAWR; ZNF302; LITAF; GON4L; BCL11A; EGR2; NEDD8; SCAND1; ZNF23; ZMIZ1; NPAS2; IRF8; UBP1; IRF6; HDAC2; STAT1; NANOG; SOX11; ZNF532; SMARCA1; MTA1; SSBP3; RBPJ; POLR3F; MED20; ZFY; ZNF12; TOX4; LIN28A; LDB1; BAZ1A; TBX3; PHF20; MED21; CHD3; NCOA6; RBBP8; ZMYND8; KDM4C; XBP1; RFX5; SMAD2; KAT6A; DNMT3B; EHMT2; ARID3A; PLAGL2; ZMYM2; TAL1; MAFF; INSR; EMX2; ZFP69B; KLF10; SMARCE1; CBX7; FOXM1; E2F5; KMT5A; SALL1; SPEN; HLTF; FUBP1; HDAC4; NR1H4; CLOCK; FHL2; ZNF623; ZNF587; MLXIP; TSC22D2; MBD2; TOPORS; ZNF3; MYCN; INSM1; PGR; KDM5D; TRIM28; NFE2L1; NFAT5; BACH2; ISL1; CUX2; TFDP2; ESR1; KAT2B; CNOT1; FLNA; ATF4; TCFL5; MYBL1; CCNE1; PITX1; FOXJ3; ZBTB20; MXI1; ZNF232; MAF; GRHL2; BTAF1; ABL1; MNT; EGR3; PBX3; FOXG1; CAMTA1; BRD2; YBX3; CTBP2; HOXA11; TRIP6; BANP; FOXA1; PHF1; SMARCA5; SLC2A4RG; NLK; MEIS2; ZNF423; RNF138; NFIB; NFIC; PUF60; HTATIP2; TLE4; PLAGL1; HDAC6; RB1; NR3C1; CEBPD