Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81772 Trichostatin-a GSE92742 NPC Human 24h 10uM EID0421
Types Number Response transcription factors
Up-regulation 153 JUN; FOXO4; CREG1; IRF3; DRAP1; MYCBP; EGR1; HBP1; CALCOCO1; GTF2F1; ZNF331; STAT1; PPARD; SIX1; ZSCAN32; UBE2B; FOSB; TOB1; HOXD1; ZNF304; CRK; JUNB; RUVBL1; NR4A1; SNIP1; VDR; GTF2A2; ZNF593; CEBPA; EHF; CEBPB; RUNX3; NFIL3; NFKBIB; ACTL6A; TSG101; CBX7; JUND; ZNF212; PIAS1; FOS; BCL3; MEF2D; ARID5A; NCOA3; CTR9; CREM; TFAP2C; TCF15; ZNF324; CRYM; SNAPC4; HOXB1; IL16; CEBPE; ZNF205; SETD3; SP110; SND1; HDAC5; TBPL1; USP16; DLX4; RUVBL2; OVOL2; CIR1; BBX; FOXJ1; ING4; LDB1; TSHZ2; NOC2L; TAF4B; INSR; CDK7; PCGF1; SERTAD2; PBXIP1; COPS5; ATF3; HIPK1; SIRT7; ELF3; POU2AF1; LYL1; ZNF224; ZBTB7A; NR4A2; HTATIP2; TAF10; SPIB; MXI1; EPAS1; SMARCD3; OSR2; RYBP; SP100; CCNE1; BRD4; TFCP2L1; MED23; CCNC; BHLHE41; HMG20B; MLX; GATA2; RBBP5; KLF11; NR0B1; LHX6; IRF6; NR3C2; HIVEP2; PPP1R13L; IRF9; TCEA2; TERF1; ZNF394; MLXIP; CCNH; JUP; TP63; TCF7; AHR; MNAT1; IRF7; NFE2; ARNT2; CITED2; ZBED2; ERBB4; ELF5; TRIB3; TGFB1; DDIT3; IRX5; EYA2; SMARCA2; HHEX; CALR; PAX5; YWHAB; ZNF160; ZBTB20; SSX1; STAT4; SNAI2; TRPS1; PEG3; TFAP2A; SSBP2; WT1; IKBKAP
Down-regulation 259 TP53; HMGA2; ERBB2; MTA1; SOX2; MYC; TFDP1; SMARCA4; ETV1; PCBD1; ABL1; PHF2; TCERG1; NFKBIA; SCMH1; SMARCC1; VGLL4; PATZ1; RFX7; SALL1; NUP62; ZBED1; RBBP4; PMF1; CBX5; ATF1; TLE1; TCF4; ZBTB1; NR2F6; NCOR1; HMGB2; HDGF; HDAC2; FOSL1; DEK; WHSC1; ZMYND11; HNRNPD; ADNP; BRIP1; FLNA; ZNF532; USP22; SOX11; ZMYM2; PARP1; SIAH2; DDX17; GLI2; ZNF227; ZNF529; ZFP64; LZTS1; SP3; BAZ1A; BCLAF1; TGFB1I1; ZEB1; RBBP7; ZNF292; ZIC1; FOXF1; ZNF711; TADA2A; PBRM1; SSRP1; HMGB1; CCNA2; ZSCAN31; TCF12; PCGF2; TSC22D3; STAT5B; ZKSCAN7; KAT2B; ID4; RAN; ZNF43; YAF2; FOXM1; NFKB1; ZNF22; ZNF84; ZFY; NRIP1; ZBTB38; GABPA; GABPB1; CBFB; ZNF189; ZNF253; ARL2BP; CTNNB1; ZNF282; TBL1XR1; XBP1; TAF9B; RBM14; ZFP30; TGIF2; VEZF1; POU3F2; ZHX2; FOXE1; CREBZF; CREB1; YEATS4; ZNF516; LEF1; OLIG2; E2F3; WDR77; EZH2; FOSL2; MBD4; PSPC1; ASXL1; MYCN; HOXB9; SFMBT1; ZNF134; FOXN3; TBL1X; YAP1; PGR; ZNF236; BRD7; TAF1D; ZNF32; WDHD1; CARHSP1; HIPK3; ZFX; GTF2I; CTCF; CHD3; BMI1; LIN28A; HMGB3; PPRC1; YBX1; PBX1; NCOA2; MLLT10; ARNTL2; DPF2; EHMT2; ZNF675; HOXB2; MAGED1; RBL1; RNF138; TOX3; SMAD4; CUX2; MED17; ZNF107; STAT6; SLC2A4RG; BRD3; SOHLH2; BPTF; CHD7; DDX5; MYBL2; ZNF672; TRAK1; RBPMS; TGIF1; RBM39; CENPF; YEATS2; ZFP36L2; PITX2; TRIM24; NCOR2; MEIS1; C1QBP; ZZZ3; ZFPM2; NFYB; SMARCE1; HIRA; ATF4; EYA1; ZIC3; PBX3; ENO1; ZMIZ1; ZNF177; PAX6; LHX2; DACH1; ZBED4; FOXD1; MEIS2; NPM1; MYB; CNBP; ZKSCAN1; NR1I2; GTF3A; PROX1; SALL2; ZEB2; BACH1; ETS2; TRIM22; NEUROD1; ZNF140; AEBP1; BATF3; PLAGL1; FUBP1; KAT6B; GTF2IRD1; ATF5; HEY1; CTBP1; HMGN3; REPIN1; NAB1; CUX1; SF1; NKX2-2; NCOA4; ZNF302; DLX2; ARID5B; ZFP36L1; DNMT3B; APEX1; INSM1; MECOM; BCL11A; SOX17; HOXB6; LOXL2; NR2F2; ASCL1; PIR; ZNF589; HLF; NR2F1; SMAD3; ZNF512B; FOXG1; EMX2; ELF1; SMAD6; YBX3; GATA6; ID3; ESR1; HOXC6; MYRF; E2F2; SUV39H1