Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81730 Vorinostat GSE92742 NPC Human 24h 1.111109972uM EID0416
Types Number Response transcription factors
Up-regulation 240 IKZF1; RELB; E2F2; MEF2C; SUV39H1; CEBPD; KDM5A; CREG1; OVOL1; KMT2D; ATOH1; SPIB; ZNF835; SRY; HIVEP3; DLX5; GFI1; IRF2; PRDM2; DOT1L; SSX1; CBX2; RAX; ZBTB16; PAX9; MLLT1; HCFC1; E4F1; NFE2; CHD2; KDM5C; ALX4; SHOX; ONECUT2; DLX6; STAT4; HSF1; PAX7; SCRT1; FLI1; BARX2; ING4; MED12; NFATC1; TAF4B; PRDM5; SOX21; HOXB1; ZNF682; UBTF; BAZ2A; COPS5; ASCL3; KLF13; TAF12; TLX3; HMX1; HEYL; NR0B1; ZNF695; NFX1; UBE2B; DLX4; PEX2; THRA; NFIX; HDAC5; IKZF3; ERG; ETV6; HR; KLF5; NR5A1; SSBP3; HDAC11; PRDM12; TFE3; RNF141; ZNF671; VGLL1; HNF4G; CREB3L2; MXD3; NFAT5; KLF15; LHX3; SAFB; EZH1; ZNF701; PRDM1; PIAS1; RBBP7; POU6F1; SNAI1; ZNF507; HOXA2; SP140; LIMD1; ZHX2; RARG; SMARCE1; ZNF141; HAND1; RORC; EHMT1; PCGF3; ETS2; ZNF556; BRD8; VDR; BAZ1B; PHF8; FOXO4; ZNF532; ZNF34; NR2E1; SMARCA5; ZNF215; BAZ1A; HSF4; NFIC; EVX1; CHD4; PLAGL1; AIP; SOX9; TCF4; POU4F2; TSC22D1; MBD2; NR1H3; HDAC7; BCL11B; CDIP1; NFYC; NCOA3; TCEB2; JUNB; IL16; TERF1; TCF20; LHX6; TP63; ASH1L; ZBED1; MAFG; HIVEP2; CEBPE; GATA1; NKX2-2; KMT2A; RUNX3; NPAS2; DDX54; ZNF117; INSR; FOXG1; PQBP1; PSMC3; TCEA1; YBX2; NKX3-2; ZNF281; KLF9; TCF7; CERS4; AES; ELK3; E2F5; EGR4; HTATIP2; AEBP1; NFE2L3; PIAS3; RBBP4; BBX; PRKDC; SATB2; ELF3; TERF2; ID3; TAF9B; TCF7L2; PITX2; HOXA7; ZNF148; HIPK2; CALCOCO1; NLK; ZNF165; CCNT1; PRDM10; ATN1; TFDP2; PGR; PHF20; HOXA5; ZFP36L2; ILF2; YBX3; SNAI2; KLF2; IRX5; MSX1; BTG1; HOXA1; PITX1; POU2AF1; HIRA; KDM5D; TBL1XR1; MYBL1; TBL1X; WNT4; DAXX; NKX2-1; PRRX1; CALR; CBX6; UBE2I; FOXC1; IRF6; LMCD1; DLX2; HDAC1; ETS1; JUP; POU4F1; BRD4; TBX3; FOS; ID2; HOXA11; CEBPB; TRIM29; NFIB; HOXA10; HMG20B; TOX3; HOXC6
Down-regulation 323 NRIP1; PHF1; NR2F6; CREB1; ZMYM2; DEK; TLE1; MYNN; PSMC3IP; THAP10; ZNF468; PCGF2; ZNF84; BRIP1; ZNF248; ZSCAN12; POLR3F; ZBTB11; TBPL1; ZFX; ATF1; SMAD4; HEY2; TP53; ZKSCAN5; HDAC3; FOXN2; EHMT2; ZIC1; MED7; RFXAP; ATF2; HOXB6; RNF2; ZNF813; SMAD5; SSRP1; ZNF239; TRIP6; TRAF6; RLF; VEZF1; ZMYND11; HOXB5; MED21; DACH1; MAML1; SHOX2; TRRAP; TLE4; ZZZ3; ZFP37; SP3; NELFB; ZNF331; FLNA; TRIM33; TAF1A; ZFP36L1; ZNF292; TAF11; FOSL1; KAT2B; ZNF180; ZBTB1; HOXB3; MECOM; ZNF266; JARID2; LDB1; TADA3; PRDM4; HIPK1; SALL2; CHD9; FOSL2; BMI1; ZNF175; PATZ1; ZNF443; CRY1; ZNF14; BANP; ZMIZ2; TRIM28; ZNF345; HIVEP1; ZSCAN31; ZNF12; ZNF217; ZNF85; ISL1; KLF10; ZNF432; PDLIM1; SFMBT1; REST; TEAD3; CDYL; ZNF135; ZSCAN9; ERCC3; ZBTB14; MYC; MED1; BNC2; BASP1; SETD2; ZNF324; BLM; NR2C1; ZKSCAN7; THAP4; ZNF571; HSF2; RNF138; ZNF202; ZNF593; C1D; PHF2; ZHX3; NFKBIA; CLOCK; RYBP; TEAD1; PCBD1; SLC2A4RG; ZNF134; TCF25; FOXO3; MAFF; SF1; CXXC1; PBX3; ZNF112; TGIF2; IKZF5; THAP11; PMS1; URI1; TAF9; RBBP8; IRF8; HOXD9; ZFP69B; PNRC1; TAF10; RCOR3; ZNF133; ZBTB40; MBD4; ZBTB38; POLR2A; BCOR; NR2F2; MNT; NFIL3; ZNF354A; E2F6; ZSCAN16; BRCA1; HLTF; KAT6B; PKNOX1; CHD8; ZNF177; PTTG1; ZNF83; TTF1; SRF; SPDEF; ZNF184; UBP1; WWC1; ADNP2; ZNF573; NFATC4; ZNF473; ZNF91; ING2; MAF; CDC5L; ING3; NR0B2; HOXB2; SIX2; L3MBTL1; PAXBP1; AHR; ID4; CCNH; LHX1; KLF11; BRWD1; AR; CDK9; SIAH2; GCFC2; GLI2; ZNF44; WDR77; ADRB2; ZNF587; POU5F1B; LOXL2; NFYA; NPM1; RRN3; VPS72; ZNF606; IRF7; CTBP1; PKNOX2; ZNF423; STAT5B; SMAD7; TRIP4; RELA; ZFPM2; RBM39; HIPK3; MITF; CARM1; TRPS1; ELK4; NR1H2; FOXF1; CBX3; GTF2I; ATF5; FOXA1; NCOR2; CUX2; PBX1; ALX1; MLLT10; CSDE1; CREB3; ZNF394; CNBP; ZNF200; ESR1; ELF4; TSC22D3; BTAF1; JUND; DDIT3; FOXF2; ZNF146; CREBL2; PTRF; BAZ2B; NCOA4; ELF1; BCLAF1; EGR2; ZKSCAN1; TCF21; CENPF; ERBB4; BHLHE41; PAX6; MEIS1; ZNF329; HMGA1; TFAM; SALL1; IRF1; GATA4; ZNF512B; EGR3; NANOG; ZNF302; ZNF136; ZNF32; TWIST1; TOB1; EHF; ARNTL2; CBFB; EYA1; STAT3; TULP4; TGFB1I1; ZNF551; CHD7; ATF3; PURA; GATA6; SMARCA1; MYRF; ZBTB20; MYCL; DNMT3B; ZNF267; XBP1; C1QBP; LIN28A; NR4A3; YAP1; TCF12; EMX2; TBX2; RREB1; WT1; RORA; HMGN3; NFE2L2; HDAC4; ST18; NR2F1; HEY1; TGFB1; HOXB7; NR4A2; PAWR; SMAD3; ZBTB18; NR3C1; GATA2; PPARG; GATA3; ZNF586