Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81712 Vorinostat GSE92742 NEU Human 24h 10uM EID0420
Types Number Response transcription factors
Up-regulation 75 EGR1; GTF2A2; DRAP1; CREG1; MYCBP; MNAT1; RUVBL2; NOC2L; CDK7; IRF3; PPARD; CRYM; MLX; STAT1; GTF2F1; LMCD1; JUN; TP63; IL16; PA2G4; CCNC; TAF10; CCNT1; ACTL6A; SIX1; CALR; STAT3; COPS5; ECD; SUPT4H1; BBX; ZNF394; CERS4; SETD3; NRBF2; TOB1; CRK; TFAM; HMG20B; CALCOCO1; OSR2; TRIP6; NFIB; NR4A1; UBE2B; FOSB; JUNB; TGFB1; CTR9; IRF7; BRD4; NKX2-1; ETV5; RBBP8; CREM; NR0B1; TCFL5; BCL3; FOS; ZNF331; RUNX1; HOXA5; HTATIP2; HOXC10; CITED2; PAWR; KLF2; HHEX; ELF3; SUB1; PURA; ATF3; IKBKAP; ELK3; NR4A2
Down-regulation 169 ZMIZ1; SOX11; KAT6B; SMARCA4; ERBB2; VGLL4; ZFP36L2; TLE1; TSC22D3; ZNF84; WHSC1; ZBED1; ADNP; FOXM1; CUX2; SMARCC1; PHF2; ZNF282; ZNF532; HMGB3; PATZ1; ZNF710; ZNF629; HDGF; CTCF; BPTF; NFKBIA; BCOR; BAZ2B; PLAGL1; MED12; APEX1; ZFP64; SMAD6; HIC2; SUV39H1; ZMYND11; MYCN; EHMT2; ZNF107; ASXL1; MAML1; SREBF2; ZBTB14; SCMH1; SALL1; NCOA6; ZBED4; PITX2; PKNOX1; NCOA2; ZNF711; ZKSCAN7; MYRF; PMF1; GLI2; CHD3; CCNA2; ZNF253; HMGXB4; TBL1X; ZNF292; MED17; ZSCAN31; SMAD4; E2F5; NUP62; TOX3; NCOA1; SP3; ZNF43; SALL2; YAP1; REPIN1; ZNF32; TGIF2; TCF12; TLE4; ZIC1; TCF4; BCL11A; PCGF3; FOXO1; ZNF93; GATA6; NCOR1; MAGED1; GTF2IRD1; ZNF146; LIN28A; HMGA2; KDM5B; ZHX2; RFX7; TAF9B; NONO; PLAGL2; ZNF189; TRAK1; PBRM1; CARHSP1; HMGB2; HDAC4; SETD2; PCGF2; ZNF443; VEZF1; CENPF; EWSR1; ID4; ZFHX3; DDX17; PNRC1; HIVEP1; BCLAF1; EP300; HNRNPD; CBX3; TRRAP; EYA1; MEIS1; MEIS2; NCOR2; LEF1; ELF4; TRIM24; PRMT2; PAX6; KMT2A; RXRA; DACH1; ZBTB1; ZEB1; NCOA4; BTG1; BIRC2; OLIG2; BRD3; HOXD3; ABL1; ZBTB38; KAT2B; HIRA; INSM1; TRIM29; MECOM; ZMYND8; SOX17; FOXD1; KLF6; MTA1; ZEB2; CTBP1; SMARCE1; NRIP1; BRD8; EMX2; CHD7; ST18; ID3; FOXF2; PIR; TRIM22; BAZ1A; PBX3; PEG3; MYB; TBX3; ZMYM2