Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81709 Trichostatin-a GSE92742 NEU Human 24h 3.333329916uM EID0420
Types Number Response transcription factors
Up-regulation 92 EGR1; DRAP1; RUVBL2; MYCBP; NOC2L; GTF2A2; IRF3; SND1; STAT1; MNAT1; CREG1; PPARD; CDK7; SPIB; MLX; MED20; DBP; MYBBP1A; FOSB; JUN; ITGB3BP; ZNF324; ZNF224; ATF3; IL16; ZBTB48; NR4A1; ETV5; PURA; RUVBL1; CTR9; PPP1R13L; CBX7; ZNF274; HDAC1; SIRT7; ELF3; CCNC; ZNF587; ACTL6A; FOXO4; MAF; ZNF654; MBD2; TCFL5; CDK2; KLF2; HMG20B; HLTF; ZNF593; ELK3; TRIP6; CRK; TP63; NR0B1; IRF7; NR3C2; ZBTB20; CRYM; NEDD8; TAF10; HHEX; TOB1; YWHAB; UBE2B; IKBKAP; SAFB2; JUNB; NFIB; BHLHE41; MLXIP; CREM; SIX1; POU4F1; JUP; ZNF160; PITX1; SREBF1; CREB3L2; CITED2; NR1D2; HEY2; OSR2; ZBTB18; TGFB1; FOS; RBBP8; ZNF281; CALR; NKX2-1; IRF8; HES1
Down-regulation 203 ERBB2; KAT6B; SMARCA4; TLE1; VGLL4; CUX2; TSC22D3; ZMIZ1; ZFP36L2; BPTF; MYCN; PHF2; ADNP; ZNF84; ZNF532; APEX1; RBM39; SMAD6; SALL2; SMARCC1; ZBED4; PKNOX1; HIC2; BASP1; ZFP64; MAGED1; NFKBIA; TGIF2; ZNF675; E2F5; CTCF; FOXM1; MYRF; BRIP1; RFX7; ZNF43; TCF12; USP22; MYT1L; PCGF3; ZBED1; BAZ2B; PATZ1; ZBTB14; ZKSCAN7; HIF1A; ZHX2; NCOA2; NCOA6; DDX17; KDM5B; MEIS1; HIPK3; SALL1; ZNF711; HDGF; VEZF1; EYA1; WHSC1; ZNF292; TBL1X; SMAD4; ZFP69B; LIN28A; ZNF177; PMF1; TOX3; ASXL1; GTF2I; NHLH2; MED17; ZNF22; PCGF2; FOXN3; SSBP3; SETD2; ZNF141; CBX5; HNRNPD; PUF60; BCOR; ZNF32; NUP62; CHD3; MED12; TP53; ZNF629; YAP1; BCL11A; PLAGL1; LHX2; ZNF529; STAT6; ZMYND11; RXRA; RBM14; ZNF189; NCOR1; SIX2; SCMH1; TOX; MED6; HIVEP1; ZFX; PBX3; UBE3A; PITX2; SSBP2; SREBF2; CARHSP1; GABPB1; CEBPG; ST18; ZNF266; TCERG1; CCNA2; TAF9B; SP3; MAML1; PHF20; REPIN1; ERF; FOXO1; CTBP1; TCF4; HMGB3; HMGB1; FOXF1; ZNF85; ZEB2; RBFOX2; HDAC4; ZIC3; ZFHX3; ZFP36L1; ARID1A; ID2; BTG1; ARID4B; NFYB; TLE4; ZNF467; NONO; BACH1; NCOA1; KAT2B; ZNF24; ZMYND8; MEIS2; HAND1; SCAND1; NCOR2; KLF13; ID4; GLI2; CTBP2; ZBTB1; BRD3; ZNF124; ABL1; ZNF140; GTF2IRD1; ISL1; HIRA; IFI16; SMARCA5; GATA6; RYBP; LEF1; TRIM29; ZEB1; FOSL2; FLNA; NRIP1; PIR; MYB; VPS72; PBX1; SMAD3; NAB1; MKL2; DACH1; TSC22D1; HMGB2; KLF9; JARID2; ATF7IP; INSM1; ASCL1; FOXF2; ZNF91; ZNF423; SMAD1; BAZ1A; MTA1; ZIC1; ID3; SAP30; NR1H2; HOXB2; HOXB6; HDAC9; ZMYM2