Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81696 Vorinostat GSE92742 NEU Human 24h 10uM EID0419
Types Number Response transcription factors
Up-regulation 106 NR3C1; MNAT1; HMG20B; GTF2A2; IRF7; MYCBP; CRYM; CTR9; SIX1; RBBP5; EGR1; DRAP1; E4F1; JUN; CRK; TOB1; CBFA2T3; CDK7; SIRT7; NFKB2; VDR; NOC2L; IRF3; IL16; HOXC10; SNAI2; STAT1; ZNF593; GTF2F1; CDK2; ZNF205; ITGB3BP; DDIT3; STAT2; NRBF2; SP100; ACTL6A; CREG1; ETV5; CCNT1; PBXIP1; IKBKAP; RUVBL2; SERTAD2; ZNF131; TRIM22; DNAJC2; TCF15; MED21; PDLIM1; PURA; ECD; ESR1; HES1; IRF8; TP63; SMAD7; FOS; TAF7; ZNF45; CBX7; RERE; THAP7; SPIB; ZNF394; SUB1; MBD2; OVOL2; UBE2B; NR4A1; POU4F1; PAX8; RB1; ELF3; BRD4; TCFL5; JUNB; BBX; HLTF; KLF2; CCNH; SP140L; SMARCA2; TRIP6; HOXB7; ETV6; TBX2; ANKRD1; KLF5; ELK3; JUP; ZNF12; TFAP2A; OSR2; MECOM; TCF21; RBPMS; PITX1; SMARCA1; BRD2; MEOX2; IFI16; BHLHE41; MSX1; MYBL1; PAX5
Down-regulation 185 SMARCA4; SOX11; ZFP36L2; TSC22D3; ZNF43; ZMYM2; ERBB2; RBFOX2; SALL2; NKX2-2; SMARCC1; KAT6B; CCNA2; HDAC2; FUBP1; HNRNPD; TLE1; NUP62; WHSC1; ZMIZ1; ZNF282; NFKBIA; PCGF3; HDGF; TAF9B; DEAF1; SETD2; ZFP69B; DDX17; RFX7; ADNP; SREBF2; ZNF93; MEIS1; HMGB3; SMARCE1; ID4; ZNF189; NCOA6; PCGF2; ZIC3; ZZZ3; ARL2BP; EWSR1; MNT; PATZ1; PBX1; BAZ2B; LHX2; PBX3; MLLT10; TRIM24; ZFY; ZNF84; NFKB1; BAZ1A; SSRP1; ID2; ELF1; NCOR1; PNRC1; HIPK2; MED1; CARHSP1; ZBED1; VGLL4; CUX2; RNF4; ELF2; PAX6; KDM5B; NCOR2; FOXM1; ZNF711; HIRA; CHD3; FOXO1; TGIF2; ZNF532; ASXL1; CTCF; ZHX2; HMGB2; ZNF83; CHD9; ZNF91; E2F3; TADA3; ZNF134; BRD3; PIAS2; KLF3; CTBP1; RXRA; PBRM1; ZKSCAN7; ZMYND11; TAF1D; GABPB1; XRCC6; HIC2; ZBED4; PEX2; HAND1; RLF; FOXF1; ENO1; LEF1; ZNF232; ELF4; PRDM10; PHF2; HIPK3; FOXG1; BCOR; APEX1; RAN; BPTF; ZMYND8; SAP30; PHF20; TRAK1; TLE4; CBX3; ZFP36L1; CHD7; DEK; BRD7; NFIL3; KLF9; SALL1; GTF3A; GTF2I; SMAD3; KLF7; ZBTB1; GTF2IRD1; POLR2A; SMAD1; NCOA2; NCOA4; ETS2; CITED2; LIN28A; MAGED1; ATF4; TSC22D1; ASCL1; TSC22D2; ELK4; MYCN; FOSL2; MYRF; BCL11A; ETS1; VPS72; DMTF1; BCL11B; KDM2A; SATB1; TBL1XR1; SMARCA5; OLIG2; TOX3; HSBP1; RBBP4; TBL1X; TGIF1; PIR; NPAS2; NR2F2; TWIST1; ISL1; HMBOX1; ZEB2; GATA6; MAFB; ZIC1; EYA1; KDM5D; CEBPD; ID3; MTA1; SUV39H1; E2F2