Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81695 Trichostatin-a GSE92742 NEU Human 24h 0.370370000601uM EID0419
Types Number Response transcription factors
Up-regulation 95 NR3C1; HMG20B; MYBL1; NR4A2; BBX; JUN; NFKB2; NR3C2; ITGB3BP; COPS5; HOXB7; RUNX1; LIMD1; SIRT7; SP140L; TGS1; CDK2; TAF4B; SUPT6H; KLF11; CBX7; MEF2C; ZNF224; ZNF394; CREG1; PRKDC; ZFPM2; NKRF; FLI1; STAT1; LMCD1; TRIP6; JAK2; POLR3C; TRIM22; DLX4; TCEA1; HLX; ZNF175; CREBL2; CDK9; NR4A3; ACTL6A; ADRB2; OSR2; EGR2; CITED2; ETV6; TERF1; MDM2; CRYM; SERTAD2; ZNF552; NR4A1; ATF3; ELF3; MEOX2; JUND; KDM4C; HTATIP2; FOSB; IRF2; SOX10; HOXC6; TFCP2; WWTR1; HDAC9; ETV5; SSBP2; KLF4; FOXN3; MAFF; CEBPB; HOXB2; BNC2; TCF21; ZNF331; TCFL5; PBXIP1; PRRX1; NKX2-1; C1QBP; MXI1; KLF2; ELF5; IFI16; AHR; TOX; BHLHE41; ETS1; DLX2; ZEB2; YBX3; HOXA5; PSIP1
Down-regulation 181 ZMYM2; SOX11; ERBB2; SMARCA4; KAT6B; ZNF266; MAGED1; ADNP; BASP1; ZNF91; PHF20; ZNF254; MAML1; TSC22D3; ZNF83; PMF1; PSPC1; SALL2; HDGF; SETD2; ZNF43; CARM1; ZNF629; LHX2; NCOA6; SMARCE1; RBPJ; CDK8; PAX6; PBX1; GTF2IRD1; ASXL1; GMEB2; ZNF84; NKX2-2; MED1; HBP1; CUX1; ZNF432; GTF3A; ZNF358; ZNF711; BRD8; USP22; ZNF606; SCAND1; GATAD2A; ZNF14; ARID3B; NUP62; RARA; PLAGL2; ZNF282; ZFP30; CCNA2; ZNF189; TRIM24; CBX3; E2F5; ZNF3; ZNF93; BRD3; TBL1X; RBM39; RLF; TAF1D; PCGF2; PUF60; NFKBIA; CUX2; CIC; YAP1; SAP18; POU3F2; HMGB1; ZNF22; MED17; NCOR2; NPAT; ZNF24; CHD3; CIZ1; TAF9B; MKL2; TGIF2; MNT; POLR2A; ZBED1; PROX1; KDM4A; BAZ1A; ID2; BRD7; CHD9; NONO; RNF111; TULP4; DMTF1; E2F3; TLE1; KDM5B; BCL11B; SF1; KDM2A; UBE3A; ZKSCAN1; RFC1; ZNF443; ZNF302; E2F6; TSC22D4; ASCL1; DDX5; RORA; SFPQ; TCEB2; TULP3; TSC22D1; PATZ1; FOXG1; FOXM1; FOXO1; MECOM; GLI2; DACH1; TOX3; RCOR1; DPF2; FOXA1; RBM14; ZMYND8; APEX1; JARID2; TCF4; YBX1; ZNF532; HOXB13; CARHSP1; VPS72; VEZF1; RUNX3; NCOA4; CERS4; TRIM28; ATF4; SMAD1; PITX2; ID4; ID3; ZSCAN18; BIRC2; SMAD6; FOXF1; SALL1; MYCN; HSBP1; LEF1; SMARCA5; GTF2I; INSR; ZEB1; RBBP4; ZBTB1; TCF12; ZNF281; OLIG2; SOX9; ATF7IP; FOSL2; IRF8; AEBP1; NR2F2; NFIB; MYB; ZBED2; MAFB; EYA1; PDLIM1; MSX1; SUV39H1; ID1