Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81693 Trichostatin-a GSE92742 NEU Human 24h 3.333329916uM EID0419
Types Number Response transcription factors
Up-regulation 177 MNAT1; GTF2A2; HMG20B; MYCBP; CDK7; NOC2L; ATF3; CAMTA2; RBL1; TOB1; HES1; ZNF45; MYBBP1A; ZNF492; DAXX; ACTL6A; YEATS4; SERTAD2; DRAP1; MAK; PIAS3; MED21; GTF2F1; EGR1; KDM5A; IRF3; PAWR; CDK2; CBX7; OSR2; TRIP11; WWP1; IRF7; ZNF239; SSX1; SMAD5; SND1; TAF4B; CRK; STAT1; MYBL1; RUVBL2; ZFPM2; ESRRA; TBX19; VDR; CITED2; ZNF571; ZNF143; CREG1; ZXDC; PEX14; TLE2; JUN; WWC1; TAF1A; TAF7; NFKBIB; ARNT; PURA; CREM; MBD2; ZNF304; UBE2B; HABP4; DLX4; IRF1; ZNF7; NR3C2; NFKB2; HOXC10; EMX2; ELK3; CTR9; PBXIP1; SOHLH2; MED7; ING2; MITF; TGS1; PGR; GATA4; WT1; ZNF34; KLF11; JUNB; PPP1R13L; NFE2L3; PIAS1; RNF14; RORA; ASH2L; COPS5; BNC1; DNAJC2; ESR1; RBBP8; ZNF227; NPM1; ZNF623; HHEX; BLZF1; TRIM24; EN2; PTTG1; MECOM; TFAP2A; KLF2; ZNF329; NFE2L2; ARID5B; PIAS4; IKBKAP; MED14; FOXE1; CCNH; ING4; NR1D2; NR4A1; KLF6; CBX4; E2F8; C1D; YWHAB; HIVEP2; HIVEP1; ZBTB38; OVOL2; ZNF226; POU4F1; TRIM22; RERE; CNOT6; KLF9; HLTF; FOS; NFIL3; NFIC; CCNE1; RCOR1; TFAP2C; NEUROD1; LPIN2; TTF2; NR0B1; ESRRG; PLAG1; CUX1; HOXB2; KAT2B; ZBED2; SHOX2; CITED1; SPIB; ANKRD1; DACH1; IRF2; PRRX1; EDF1; BHLHE41; TP63; SCAND1; HEY2; FOSB; MSX1; KLF10; MEOX2; BMI1; LEF1; ATF7IP; KLF4; ZBTB18; CALR; HLF; SSBP2; TFEC; AHR
Down-regulation 253 MTF2; ERBB2; ZNF91; SMARCA4; TLE1; KAT6B; ZZZ3; ZMYM2; ZFP36L2; ZNF43; FOXO3; MAZ; TSC22D3; HMGB3; CARHSP1; DEAF1; RBFOX2; CCNA2; MED1; ZBED1; ZNF93; SALL2; ZMIZ1; RFXAP; ZNF358; HDAC2; PATZ1; SMARCC1; PBRM1; NFKBIA; SREBF2; ZFY; ZNF84; PBX3; CHD9; CBX5; ZFP36L1; NUP62; HMG20A; KMT2B; EP400; TBL1X; SMAD4; HMGXB4; SOX3; ZNF85; GABPB1; ZNF32; RNF10; NRIP1; BAZ2B; ZNF134; USP22; ZNF532; RYBP; CUX2; ZNF24; PCGF3; ZNF282; PUF60; ZNF629; ZNF273; ZNF430; CASZ1; APEX1; KDM5D; VGLL4; MDFI; TCERG1; SMARCD3; PARP1; PHF20; HIF1A; RBBP4; GTF2IRD1; SSRP1; PCGF2; KAT5; HDGF; USF2; HEY1; CHD8; ZNF423; BRD3; REPIN1; ZNF669; ING3; ID2; CARM1; ZNF668; KLF7; TLE4; TFEB; SP3; ZNF606; PMS1; ZNF202; RAN; UBE3A; SUPT5H; ZFP64; CTBP1; FOXK2; MYCN; ZNF512B; NCOR2; TRAK1; MAGED1; TCF3; ZNF665; CENPF; ZNF160; BAZ1B; TBL1XR1; CTCF; MEIS1; ZNF195; POU5F1B; IRF5; SPEN; PMF1; ID3; NR2F2; ZNF44; SUMO1; ZNF688; ZBTB7A; KLF1; HMGB1; DPF2; TCF25; FOXG1; RFX7; SOX2; UBE2L3; ZNF136; MYT1L; ARID5A; PBX1; ARRB1; ZNF721; ZNF189; SMARCE1; CSDE1; ISL1; SIM2; ZNF544; KDM5B; ZNF536; BPTF; KDM4A; BATF; POU3F2; ZEB1; ADNP; ZNF146; SIX2; ZBED4; MED16; SMAD1; WHSC1; RB1; CIZ1; RBM39; EYA1; PRDM14; GLI2; NLK; BAZ1A; ZNF12; SALL1; TFDP2; ASCL1; SUPT6H; UBE2I; ETV1; ADNP2; RXRA; NFATC4; ZNF611; FOXF1; ZFHX3; TTF1; TCF12; KAT7; ZNF562; FOXO1; KDM2A; ZNF443; ZFHX4; ID4; ZNF117; TP53; RNF138; KAT8; EHMT2; KLF13; ERF; ZBTB43; LIN28A; ZBTB1; YBX1; TSC22D2; SMARCB1; THAP4; BCL11A; TRIM28; SAP30; FLI1; HMGB2; YBX3; NPAS2; NCOA4; VPS72; MED13; POLR2A; NFE2L1; ZNF22; E2F3; SMARCA5; POU2AF1; ZSCAN18; PHOX2B; PITX2; PIAS2; MYRF; TSC22D1; GTF2I; FOXN3; TGFB1I1; KMT2A; TAL1; ARID4B; CTNNB1; LITAF; NR2F1; BACH2; TRIP6; HMBOX1; ABL1; MAF; SMAD6; ATF4; ZEB2; FLNA; ERG; HIRA; CTBP2; PDLIM1; CEBPD; MTA1; SUV39H1; E2F2