Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID81676	Trichostatin-a	GSE92742	NEU	Human	24h	10uM	EID0415

Response Information :

Types	Number	Response transcription factors
Up-regulation	142	IKZF1; RELB; CREG1; FOS; NOC2L; TOB1; ZNF654; ERCC2; ZNF281; HMG20B; GTF2F1; IRF7; CBX7; RBBP8; COPS5; TP63; NFKBIB; EGR1; CDK2; GLI1; ZNF593; ZNF45; SIRT7; DBP; STAT1; MYBL1; KLF13; TGS1; BCL3; GTF2A2; ITGB3BP; NFE2L3; NFKB2; PPP1R13L; MNAT1; TAF4B; JUNB; KDM4C; KLF2; STAT2; SP110; MYCBP; SNAPC4; STAT3; ATF3; CRYM; MLX; FOSB; SUPT4H1; TERF1; PPARG; PRRX1; HDAC7; CDK9; JUN; DRAP1; BRD2; TCF15; WWC1; SP140L; HLTF; THRAP3; ELK3; KMT5A; BBX; SNIP1; MEF2C; TAF1A; IKBKAP; BRD4; TAF9; ZNF266; USP16; ZBTB48; PBXIP1; ING2; EN2; CRK; NR3C2; TGFB1; SSX1; MED21; NR4A1; SLC2A4RG; HHEX; SAFB2; ETV5; HOXC10; EHF; ACTL6A; TSC22D4; SP100; CCNC; DAXX; UBE2B; CTR9; ARID5B; PURA; RNF6; KLF11; HOXA10; HOXB7; KLF5; RB1; DDIT3; TRIM16; ETV6; SPIB; RUNX3; CEBPB; BHLHE41; URI1; SUB1; ZBTB11; TRIM22; SMARCA2; MSX1; ZBTB18; LPIN2; ZMIZ2; CCNH; MBD2; SMARCA1; NR4A2; BIRC2; PHF1; SOX9; TBP; SNAI2; HOXB6; ELF3; NFIB; SREBF1; POU2AF1; TRIP6; ATF6; HLF; IRF1; LMCD1; NFE2L2; CALR; ESR1
Down-regulation	239	SOX11; KAT6A; MEIS2; ZNF83; CBX5; ZNF532; NCOR1; TLE1; ERBB2; VGLL4; HIC2; ZNF337; HMGB3; ZFP36L2; FOXO1; BTG1; ZNF282; SMARCA4; TCF12; CARHSP1; HEY1; INSM1; ZFY; LHX2; ZBED1; PATZ1; BPTF; RXRA; EYA1; DDX17; RBFOX2; TOX3; XRCC6; WIZ; BASP1; SALL1; SALL2; TSC22D3; ZNF135; TEAD1; LMO1; AGO2; HMGB2; SMAD5; PRDM10; FOXM1; MTA1; ZNF334; ZFHX3; ZNF248; ZNF189; PCGF2; PMF1; PHF2; RBPJ; ZNF253; KDM5D; PKNOX2; LEF1; NCOA6; HDGF; ZNF24; ARID1A; MEIS1; TCEB2; FOXF1; ZNF43; ZMYM2; ZNF84; POU3F2; TOX; ISL1; NFIL3; ZNF606; SMAD6; ASCL1; CHD3; KDM5B; GTF2IRD1; BRD7; ZNF85; FOXG1; ZNF510; SETD2; ZNF177; ZMIZ1; MBD4; ZNF516; RFX7; ZNF175; ZFX; PKNOX1; ZNF614; FOXO3; ZIM2; SMAD7; MED12; MNT; ADNP; PUF60; MAF; PLAGL2; OLIG2; PBX3; BACH2; ZBED4; ZNF93; MYCN; CUX1; SOX2; NCOA4; HOXA11; TLE4; TCF4; ZNF32; SCMH1; FOSL2; ZNF264; ZNF629; SOX15; MAGED1; ID4; UBE2I; ZKSCAN7; HOXD10; CTCF; RBM39; ZNF665; GABPB1; HOXD11; BRWD1; ZFP64; KAT8; PBRM1; CNOT2; L3MBTL1; ZNF292; ARID3A; CUX2; TBL1X; ZFP69B; HNRNPD; TRIM24; CCNA2; SMAD4; ST18; CHD8; ELF4; RLF; NKX2-2; SOX3; ZMYND11; PCGF3; MED13; UBE2L3; ASXL1; SKI; LITAF; PAX6; ZNF415; BAZ2B; NPAS2; TFAP2A; ZHX2; SMARCC1; PTTG1; CLOCK; PARP1; ID3; VPS72; BAZ1A; NCOR2; HOXD3; ZNF302; NUP62; SMARCD3; CARM1; APEX1; RBM14; SMARCB1; PITX2; HIRA; PFDN5; TRAK1; CENPF; REPIN1; ZNF711; SIX2; ATF2; ZNF721; NONO; RAN; ZNF426; NHLH2; BRIP1; SMARCE1; CHD9; BRD3; PEG3; PBX1; ZEB1; ID2; SMARCC2; SMAD1; TGIF2; SATB1; ZEB2; KMT2A; SUV39H1; MAFF; MYT1; BCL6; STAT6; NR2F2; BCL11A; ATF4; ZNF652; ZFP36L1; PHF20; ETS2; NFKBIA; CHD7; SCAND1; TCF21; PDLIM1; ZNF589; ABL1; MED1; HMBOX1; FOXF2; CEBPD; TSC22D1; EMX2; GATA6; ENO1; AEBP1; SMAD3; TRPS1; SAP30