Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81663 Trichostatin-a GSE92742 NEU Human 24h 0.370370000601uM EID0414
Types Number Response transcription factors
Up-regulation 89 IKZF1; NR3C1; CEBPD; ERG; POU2AF1; PRDM2; FHL2; CREG1; RREB1; TCF7; WWTR1; POU4F1; HESX1; CRYM; NR5A2; CDK2; ZNF580; MDM2; CCNC; CNOT3; ID3; ZNF124; RUNX1; IFI16; JUN; TFEC; IL16; MYBL1; TFAP2A; FOXO1; SIX1; TBX2; STAT4; THAP7; HMGA1; TDP2; TOX; LYL1; TCEA1; LOXL2; LHX6; HLX; CTR9; NR3C2; CD3D; FOXG1; SLC2A4RG; GFI1; CNOT6; TGFB1; KLF2; TGFB1I1; SP100; EGR2; TAF11; PSMC3; GMNN; DBP; YBX3; PLAG1; MSX1; SMAD1; SMARCA1; LITAF; MBD2; MNDA; STAT1; HOXB7; NR1H3; MTDH; IRF7; KLF10; SOX17; MAFB; MECOM; TAL1; EYA2; AEBP1; ARID5B; LEF1; ZFPM2; TCFL5; WT1; TRIB3; HOXB2; TERF2; NFE2L3; BTG1; ESR1
Down-regulation 167 NFKBIA; TOX3; DMTF1; MTA1; ERBB2; ZSCAN18; TBX3; ZNF84; BAZ2B; TRAK1; SUV39H1; POLR2A; BRPF1; ZNF24; SMARCA4; ATF7IP; MYCN; CIZ1; FOSL2; ZNF177; ZMYM2; ZNF93; MAGED1; SSBP2; TP53; SREBF2; HDAC5; KDM5B; TEAD1; ZEB2; NCOA6; ZNF443; KDM4A; PHF2; TRIM24; ZNF783; E2F6; SMARCA2; SIX2; NCOA1; MEF2A; KDM5A; MKL1; LHX1; UBP1; ING3; ZNF432; ZMIZ1; ZNF211; RXRA; VEZF1; NUP62; ZNF516; WWC1; STAT5A; ZNF146; ADNP; RFX7; ATF1; ZIC1; AATF; ZNF202; ZNF239; SALL2; RNF111; MYCL; EN2; BRD3; JUND; ZNF710; ELF2; ZNF532; ORC2; GTF2IRD1; PCGF2; CBFB; NELFB; MNT; ZKSCAN7; HR; PATZ1; SOX9; MED27; HIPK3; TADA3; TCF12; ZNF813; HDGF; BAZ1A; SMAD4; OLIG2; EDF1; ZMIZ2; TRIP4; BLM; RORA; RHOA; LHX2; HMGXB4; ZBTB1; PREB; NKX2-2; DNAJC1; ASCL1; TCF20; RCOR3; ZNF83; RBM39; CTNNB1; KLF11; ZBED1; KLF6; KDM2A; YBX1; ING2; PAX6; TEAD3; ABL1; BTAF1; BRD8; HMBOX1; RLF; PBX3; BATF3; MED17; ZNF140; BMI1; NR2F2; ZNF91; ST18; MAML1; VPS72; PHF20; ECD; EYA1; DDIT3; STAT6; TSC22D2; REPIN1; DACH1; ZMYND8; KAT6B; SCAND1; MEIS1; TRIM29; ZNF43; SIAH2; ZFP36L1; TBL1X; ZNF131; ELF4; FOXJ3; JAK2; CHD9; ID4; INSM1; ERBB4; NFIB; BHLHE41; ATF3; ZBTB20; ZBTB18; BHLHE40; PEG3; TWIST1; FOS; SMAD3