Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81662 Trichostatin-a GSE92742 NEU Human 24h 1.111109972uM EID0414
Types Number Response transcription factors
Up-regulation 132 EGR1; TFAP2C; ZNF331; NOC2L; HOXC8; CCNH; JUN; MYBBP1A; MYBL1; IRF3; ATF3; CBX7; TGS1; MYCBP; STAT1; CREG1; COPS5; ZNF394; GTF2F1; MED15; CRYM; PPARD; PPP1R13L; CREBL2; CDK2; GTF2A2; CREB3; OSR2; SPDEF; ZBTB48; TDP2; AHR; TP63; C1QBP; SUMO1; HMG20B; ELF3; ZNF205; UBE2B; ZNF593; POLR3C; ZNF654; IRF6; ACTL6A; CNOT3; EPAS1; POU2AF1; OVOL2; VDR; TTF2; BAZ2A; RBPMS; NFIC; NFE2L2; NR0B2; ZNF611; TRPS1; ZNF224; TAF4B; TGFB1; ZNF512B; CDIP1; E2F8; CCNC; RING1; RBBP8; HOXC10; NR4A1; ZNF557; KLF2; SP100; CALR; SIRT7; RUVBL2; BHLHE41; MBD2; FOSB; CTR9; FOXI1; DBP; IKBKAP; ANKRD1; HOXD1; TCEA1; HHEX; HOXB7; KLF5; GMNN; YWHAB; ZNF544; DDIT3; ARID5B; ELF5; MECOM; TLE2; WWTR1; HOXA5; REL; ARNT2; ERBB4; NFIB; TFCP2; ZNF430; YBX3; TRIM22; NR4A2; HDAC9; SPIB; ZNF131; PTRF; KLF11; BRD4; HOXB6; ESR1; TOB1; CREB3L2; INSR; TRIB3; TRIP6; SNAI2; TFCP2L1; HOXB2; EHF; JUNB; HMGA1; KLF4; SOX17; TWIST1; WT1; NR1H2; FOS; ZNF91
Down-regulation 278 TOX3; SOX11; ERBB2; BASP1; MTA1; MAGED1; ZNF711; ADNP; NUP62; PMF1; ID3; SMARCA4; NFKBIA; BRD3; ZMIZ1; ZNF84; ZMYM2; TCERG1; TCF12; MYCN; ZNF189; PATZ1; GABPB1; ZNF529; SALL1; TLE1; CCNA2; SUV39H1; USP22; PKNOX2; NRIP1; KAT7; FOXO3; ZNF24; ZNF302; E2F5; RBM14; DMTF1; ZBTB14; SALL2; DNMT3B; TP53; ZNF532; WHSC1; RFX7; HNRNPD; HMGB2; YAF2; CTCF; EYA1; KDM5B; ZNF177; ZKSCAN7; RFX5; PUF60; ATF7IP; TRRAP; BPTF; DPF2; SETD2; ZBTB1; ID2; TSC22D3; EP400; HDAC2; ZNF629; OLIG2; PTTG1; ZEB2; CUX2; ZNF672; NRF1; SP3; ZNF292; CARHSP1; NCOA1; ABL1; ZNF287; REPIN1; ZBTB24; TRAK1; ID4; SMARCA5; VEZF1; PCGF3; ZNF282; ALX1; PARP1; BATF3; HIF1A; YBX1; TRIM32; PRRX2; TCF4; HDGF; SCMH1; ASXL1; PHF2; APEX1; MYB; TBL1XR1; BAZ2B; BCL11B; ZNF236; ZHX2; MBD4; HEY1; CHD3; PCGF2; ZFP64; FOXF1; ZNF506; CBX3; ZNF334; TLE4; FOXM1; HMGB3; ZNF764; ZBED1; JARID2; RBBP4; TBL1X; ZSCAN12; ZNF23; PLAGL2; HMGA2; HSF2; NHLH1; POLR2A; PBRM1; PITX2; PHF20; LEF1; ZNF248; GTF2IRD1; XBP1; CBX5; MED1; NCOA4; LIN28A; ZMIZ2; KAT2B; PBX1; ZNF184; NCOR2; CREB5; ZNF443; SSRP1; CENPF; SOX12; TOX; MNT; SMAD2; ATF1; NFIL3; SMAD5; BRD8; BCLAF1; SOX2; DDX17; ZIC3; E2F3; NFAT5; RLF; HDAC4; KDM2A; USP21; NKX2-2; NCOA6; NAB1; CHD7; CREBZF; TGIF1; SMARCE1; POU3F2; PHOX2B; BAZ1A; ZNF32; ZNF516; SFPQ; TRIM28; BACH2; RNF4; SATB1; LPIN2; MED7; TAF9; BCOR; NFATC1; MAF; HMGN3; ISL1; ZEB1; SAP30; TRIM24; ASCL1; PSPC1; VGLL4; ZFP36L2; ING3; FOXD1; SIAH2; RXRA; LHX2; GLI3; PDLIM1; DACH1; CTNNB1; NONO; ARID4A; RHOA; GLI2; PKNOX1; MAML1; SMAD6; ING2; MYRF; RNF111; BMI1; ZBTB32; HSBP1; MEIS1; TCF25; CARM1; ELF1; NFKB1; NHLH2; RBPJ; MYT1L; ZNF22; MSX1; TULP4; PNRC1; TRIM16; IRF4; SOX9; EDF1; SATB2; BCL11A; ZNF43; ARL2BP; HIVEP2; SCAND1; TGIF2; HIC2; ZNF423; BTF3; ZBTB38; FOXJ3; INSM1; DNAJC1; ZNF107; FOXG1; ZBED4; BATF; UBE2I; ZNF267; PBX3; ZNF83; CRY1; TSC22D1; MKL2; TAF9B; NR2F2; CTBP1; KAT6B; PAX6; DDX5; MED24; ENO1; ZFP36L1; IRX5; NCOA2; KDM5D; EGR3; ZBTB18; ID1; SMAD3