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Overview Perturbagen Expression Profiles Transcriptional Responses
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Overview Perturbagen Expression Profiles Transcriptional Responses
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Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81642 Trichostatin-a GSE92742 HEK293T Human 24h 10uM EID0233
Types Number Response transcription factors
Up-regulation 183 ADRB2; KDM5B; HMG20B; DRAP1; PPARD; OSR2; FOXO4; EZH2; SOX4; SP110; RHOA; IRF7; IRF9; NR4A1; ATF3; UBE2B; HES1; STAT3; HABP4; NFIL3; ZNF331; LDB1; IRF3; SNIP1; HBP1; GTF2A2; ARID5A; HINFP; CERS4; IRF8; HDAC5; TBP; SMARCD2; CREM; KLF2; BCL10; ING1; TBPL1; NCOA3; CDK7; SOX2; RYBP; ZNF506; PHF1; BCL3; YBX2; SPIB; CITED2; TCEA2; PBXIP1; CBX4; CRYM; TEAD3; ETS1; ING4; SIN3B; RUNX3; ZNF34; TCF7; HMGB3; GMNN; CTBP2; JUNB; PRDM12; SUPT4H1; BRF2; ZNF212; MYCBP; JUND; TCF21; ZNF224; CALCOCO1; CTR9; TBX3; ZNF274; MAFG; NRBF2; ZNF10; SUZ12; ZNF117; CSDC2; RBBP5; TRIM24; ZNF324; MNT; NR4A3; BRD4; BRD2; SNAI1; ZBTB18; CBFA2T3; BANP; KLF7; ZNF654; DDIT3; HSF2; SIRT7; HOXD1; SAP130; ETV5; AFF4; BIRC2; POU2F2; ZNF91; EGR3; ZFP36L1; PRDM2; KLF11; PIAS1; EGR1; ZNF211; SSBP2; ID2; PSMC3IP; TAF4B; KLF10; ZMIZ2; CRK; PIAS2; NR0B1; NEDD8; MKL1; BTG1; SIX1; SND1; CEBPB; RCOR1; SUMO1; ZBTB48; ZNF160; ZNF93; RELB; ZNF721; ZNF432; ZNF3; ATF7IP; INSR; SETD3; EP300; NR4A2; SMARCD3; CCNE1; MYCL; PNRC1; LMCD1; TSG101; TFAP2C; MYT1; ZNF44; TSC22D2; SOX9; FOS; TDP2; DLX2; AHR; PAX5; WT1; ZNF226; FOSB; STAT1; PAWR; CREB3L2; ZNF443; NKX3-1; TOX; ZNF329; MYCN; NR5A2; TOB1; KLF5; ENY2; IRF1; ZNF394; JARID2; TFDP2; ARNTL; ELF3; JUN; ZNF611; ZNF410; GATAD2A; MNAT1; KLF13
Down-regulation 291 TSC22D3; PCBD1; MTA1; NRIP1; HOXA10; MYBL2; RFX5; ATF1; PHF2; USP22; TFDP1; HOXA5; SUV39H1; SPEN; PPARG; C1QBP; ZFP64; VPS72; FOXM1; TP53; MYC; THAP4; ZMIZ1; SMARCA4; NUP62; BCLAF1; WDR77; SMAD3; CCNA2; SMARCC1; ADNP; PMF1; SSRP1; SALL1; ZMYND11; ZBTB38; HOXB9; HDGF; PRMT2; DEAF1; EP400; SETDB1; CBX5; NCOR1; DEK; HMGA2; ABL1; ZBTB1; STAT5B; TEAD4; NR2F6; RAN; UBE3A; CBFB; XBP1; ORC2; ZNF33B; ALX1; PURA; TAF9; ERBB2; DDX17; SCMH1; ZZZ3; ZBED1; ZNF580; NCOA2; HSF1; ZNF146; CHD9; ZNF282; MED24; PATZ1; ZSCAN31; GCFC2; ELF1; MEIS2; ZNF384; TRIP6; HOXA7; TTF2; ZBTB14; RREB1; HOXA4; ZNF16; ARNTL2; PUF60; PHF8; ATN1; CENPB; NAB1; PBRM1; RXRA; RBBP4; HMGB2; ZFP36L2; MED16; MED12; URI1; CSDE1; GTF2IRD1; YEATS4; REPIN1; HOXB7; CNBP; ZFP30; HNRNPD; MTDH; ZNF614; MBD4; LMO1; UBP1; ATF5; MLLT10; SMAD4; UIMC1; TCEA1; WWTR1; KLF9; TFAP2A; NR1D2; PRDM13; FOXJ2; SFMBT1; TRIM29; DNAJC2; STAT6; USP21; NCOA6; PHIP; RBM14; ZNF292; TFCP2; RFX7; HMGA1; BRD7; TAF9B; COPS2; PSMC3; SIAH2; CAPN15; MAZ; FHL2; RARB; TRRAP; TFAM; YBX3; FOXI1; HIRA; PIR; BAZ1A; ZHX2; SATB1; REXO4; FOXF2; KAT2B; SF1; HIPK3; FLI1; ZFP69B; NFE2L2; MEN1; APEX1; NHLH2; SUB1; HLF; SOX17; CIZ1; NCOR2; BRCA1; MED1; HMGB1; MYBBP1A; DPF2; MBD3; TFAP4; CHD7; PPRC1; PDLIM1; CTBP1; CUX1; ZNF629; ZNF232; UBE2L3; ID4; GFI1; CBX3; MECOM; SMAD1; ZNF131; TADA3; BCOR; RXRG; AGO2; CAMTA1; IFI16; PPARGC1A; HOXA11; NFYB; ZBED4; STAT5A; TRAK1; GATA4; ZNF672; GABPA; BMI1; ZEB2; MITF; CHD3; CTCF; TBX1; TCERG1; BAZ2B; HCFC1; SMARCD1; FOXA2; HOXD11; PCGF2; ASXL1; E2F2; E2F5; HOXB2; PA2G4; BHLHE41; TRIM27; EHMT2; LIMD1; RBFOX2; AES; ZNF652; BRD3; BNC2; ELK4; HIPK2; CBX6; TFCP2L1; RBM39; FOXE1; PHOX2B; MKL2; NCOA4; NFKB1; TDRD3; TEAD1; MED4; CITED1; ZFY; KAT7; BACH1; YAP1; BATF3; TFEB; NPM1; SIX2; TBL1XR1; PLAGL2; CCDC59; SOX10; HOXC4; HOXC10; PAX6; PBX3; HOXB6; PQBP1; KMT2B; ETS2; SAP30; HOXC6; PMS1; TGIF2; FUBP1; MED13; KMT2A; BRIP1; SALL2; MYRF; RUNX1; POU5F1B; SP3; JAK2; ZNF512B; ZNF532; NKX2-2; GTF3A; GTF2I; ZNF248; HMG20A; BHLHE40; WHSC1; STAT4; ZNF189
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