Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81527 Trichostatin-a GSE92742 HEK293T Human 6h 2.5uM EID0235
Types Number Response transcription factors
Up-regulation 100 SOX4; FOXO4; HMG20B; DRAP1; MNAT1; PPARD; TSC22D3; CDK7; EZH2; ARID4B; MYC; ARID5B; STAT1; KDM5B; SIX1; FOS; IRF7; RBBP5; JUN; CRK; HABP4; SOX2; RELB; TBPL1; HBP1; CALCOCO1; MXD3; PBXIP1; BRD4; CTR9; TCF7; TBX3; TXNIP; JUNB; TLE4; FOXG1; NR3C2; STAT2; SSBP2; THRA; SMARCD3; BCL3; NCOA3; MAF; MED25; SMAD7; SPDEF; DLX2; SPIB; ZFHX4; ING1; ADRB2; TOB1; BCL10; LPIN2; NEDD8; CRYM; ZBTB18; TSC22D4; NKRF; CBFA2T2; PIAS1; LDB1; EYA2; OSR2; ID2; MAGED1; TERF1; SND1; HINFP; UBE2B; ZMIZ2; TAF6; RYBP; DDIT3; ARNTL; HOXD1; PCGF2; MXD4; CHD4; ZNF443; BBX; ZNF281; CREB5; ITGB3BP; ACTL6A; SETD3; KLF13; CD3D; BACH2; EYA1; CERS4; IRF9; ZNF117; EGR3; CCNE1; CITED2; NR4A1; ZNF331; TAF10
Down-regulation 179 NFKBIA; SUV39H1; TCERG1; USP22; XBP1; SMAD3; FOXO3; ZBTB14; HMGA2; CCNA2; RFX5; GABPB1; ADNP; CNBP; BCLAF1; NRIP1; VPS72; PMF1; SSRP1; TFDP1; ZMYND11; CSDE1; MYBL2; SMAD4; ZFP64; DNMT1; FOXM1; PHF2; PUF60; CTCF; UBE3A; REPIN1; ZMIZ1; RREB1; PHIP; RBM14; NFX1; NFKB1; C1QBP; KAT2A; ZZZ3; SETDB1; PATZ1; HIRA; TEAD4; PAXBP1; SALL1; TFAP4; NCOR2; SNW1; PPRC1; ZNF146; ATF1; TFAP2A; ZSCAN31; ZNF7; NEUROD1; CAMTA2; KAT6B; ZNF282; DEK; STAT6; ZNF131; CIZ1; MED1; ATF5; NCOR1; KAT5; PBRM1; ZNF629; ORC2; ALX1; NUP62; ARL2BP; HDGF; MTA1; CBFB; TRIM29; KAT7; MTDH; DNAJC2; ZBTB1; BRD7; WHSC1; ZFP36L2; SFMBT1; NAB1; GCFC2; CTBP1; SP1; ZNF512B; UBP1; LIMD1; RNF138; TRRAP; ZNF202; ZNF33B; REXO4; RXRA; ELF4; WWC1; ELK4; WDR77; STAT5A; SOX17; SRF; CAPN15; ZNF384; PHF8; SIAH2; CHD7; FOSL1; YEATS4; EN1; RFX7; ZFP69B; DDX54; ZNF227; MECOM; SCMH1; FUBP1; PRDM13; TFCP2; NRF1; HNRNPD; CNOT6; BPTF; TRIP6; BACH1; COPS2; TAF5L; ARNTL2; ZNF532; TCF12; MEIS2; ZNF134; PRDM10; GTF2I; ATN1; ZHX2; MED24; E2F6; AGO2; CHD3; RAN; ZNF292; EWSR1; ZNF672; NFYC; MED12; MLLT10; EP400; ERCC3; TRAK1; NCOA6; ZBTB24; ZBTB38; CBX5; CUX1; NFYB; SMARCE1; BATF; ZNF140; ZNF24; NPAS2; GTF2IRD1; SF1; MGA; URI1; PAX6; USP16; RNF14; ERBB2; ZIC1; PIR; CREBL2; CHD9; HMGXB4; ZIC3