Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID81484 Trichostatin-a GSE92742 HA1E Human 24h 10uM EID0489
Types Number Response transcription factors
Up-regulation 161 ZNF331; NR4A2; CREG1; ZNF224; ATF3; CBFA2T3; ZNF778; PIAS1; CERS6; NCOA3; ZNF10; HOXD1; ZNF43; FOXO4; HBP1; ZNF345; ZBTB20; TGFB1; BAZ2A; CDIP1; HEY1; INSR; SOX11; JUN; TAF1; SALL2; L3MBTL1; SOX2; ZNF354A; SIN3B; CREM; ZNF165; POU2F1; ZNF394; MXI1; EZH1; ARID3B; ZNF415; SETDB1; ZNF117; ID1; NLK; CEBPZ; SUMO1; ZNF536; ZNF235; ARNT2; URI1; ZNF195; MED14; ZNF34; ZNF671; GTF2A2; GATA2; CUX2; TCEA2; LYL1; TLE2; BCL11B; ZNF274; ETV1; ESRRG; CIR1; ST18; MEOX2; THAP11; TCFL5; ECD; NR3C2; VPS72; NR4A1; CTR9; KMT2A; TOPORS; INSM1; MECP2; TXNIP; ZNF711; NR4A3; IRF9; SPDEF; TERF1; ZNF124; RBBP5; SMAD1; HTATIP2; FOXF2; RSF1; KLF9; KAT6B; ID3; ZNF665; CCNC; TDP2; CAMTA1; HMBOX1; BARX1; TSG101; NHLH2; IL16; EPAS1; ZXDC; FOXJ3; SATB1; HOXA1; ZNF589; CDC5L; NR0B1; EYA1; COPS2; SOX10; CHD1; TWIST1; RBL2; NFATC1; ZNF544; YBX1; SIX1; ZNF573; ZNF211; NKX2-1; NR2F1; C1QBP; STAT1; HDAC1; BANP; FOS; EGR2; MBD4; BCL11A; SREBF1; HMGN3; ASCL1; ZNF606; NFAT5; ZNF423; SPIB; HOXB13; SOHLH2; WWTR1; TOB1; TFDP2; TRPS1; REL; CREB3L2; RUNX3; CHD7; POU2AF1; FOSB; PEG3; BACH2; HHEX; FOXN3; TBX2; AEBP1; ZSCAN18; PAX5; TCF4; NR1D2; ZNF586; RUVBL1
Down-regulation 224 NFKBIA; PAX8; TP53; PCBD1; SUV39H1; CCNA2; SMARCA4; XBP1; FOXM1; FOSL1; NUP62; STAT6; USP22; IRF2; TEAD4; PSPC1; TBL1XR1; REST; KAT7; BHLHE40; ZZZ3; HIVEP1; SETD2; FOXL2; VEZF1; RBL1; SMARCE1; POLR2A; UBE2I; ZFP36L1; SNW1; NRIP1; GTF2IRD1; SFPQ; FHL2; NFKB1; CNOT2; TCERG1; HOXA7; CENPB; PITX2; NR2F2; SCAND1; MED1; SOX17; BCLAF1; MAX; ZFP64; BAZ1A; HOXA11; EDF1; NPM1; SMARCC1; PHF2; HIVEP2; MYC; TRIM16; CTBP1; WHSC1; MEIS1; GABPB1; MED24; TCF25; HOXA10; RBM14; FLNA; ZEB2; TSC22D3; HDGF; ZMIZ2; MSC; RELA; SIAH2; CBX3; CREB3L1; ZFX; DPF2; PLAGL1; FOSL2; ZNF146; ZNF593; PMF1; TRIM28; VGLL4; RELB; BAZ2B; ARNTL2; DEK; CRK; YAF2; WDHD1; ABL1; TFDP1; RBBP7; MAZ; CENPF; TBPL1; BRCA2; LMCD1; RARA; MKL1; BASP1; MTA1; BAZ1B; HIPK3; KLF12; EMX2; GATA6; TGFB1I1; UBP1; MED16; NFYB; CAPN15; CTNNB1; SSX1; E2F3; LOXL2; MED15; UBE3A; NCOA6; DR1; MAFF; SP3; WT1; TRIM32; RNF4; TRIM27; BATF3; ELK1; ZNF764; BPTF; KAT5; CHAF1B; DDX54; RUNX1; REPIN1; ZNF292; BRD3; ZNF672; PATZ1; ZNF24; SLC2A4RG; ELF1; NCOA4; PLAGL2; ENO1; ATF1; ZNF410; CRY1; ZKSCAN1; TAF1D; ADNP; EED; HOXC10; SUPT3H; ZNF217; ZNF516; SMAD2; ZNF22; MAGED1; YEATS4; ZMYM2; ZNF770; HOXC6; SMARCA2; MED6; TRIM29; PHF20; CALR; FOXJ2; PBRM1; CEBPB; NELFB; PREB; PSMC3IP; ZNF189; GATA4; ZHX2; ZNF267; KDM2A; APEX1; PBX1; HNRNPD; ZNF12; LPIN2; TLE4; MED27; ATF5; PCGF2; ZNF226; SFMBT1; NKX3-1; ZNF432; ATF4; PUF60; DAXX; HOXB7; SALL1; KLF2; SMARCD2; CTBP2; YBX3; NCOA1; ZBTB1; TSC22D2; ZNF468; KAT2B; BBX; ZMIZ1; TGIF1; CARHSP1; BCL3; HLF; ARID4B; TSC22D1; TBX3; RBPMS; EGR3; KLF4; PDLIM1; GATA3; IFI16; LEF1; ESR1