Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID81161	Trichostatin-a	GSE92742	NPC	Human	6h	10uM	EID0486

Response Information :

Types	Number	Response transcription factors
Up-regulation	124	FOS; CREG1; UBE2B; EGR1; FOXO4; CDK7; CDK2; JUNB; NOC2L; JUN; TFAP2A; ATF3; SIX5; FOSB; CALCOCO1; NR4A2; SPIB; NR2F1; TCF15; PPARD; NR4A1; NR4A3; ZNF331; MEF2D; PROP1; CITED2; CEBPD; HOXD1; ZNF224; HMX1; CEBPE; KLF11; BAZ2A; SIRT7; MXI1; FOSL1; BRD4; BLZF1; IRF7; TRIB3; DDIT3; ZNF205; ZNF394; HINFP; PBXIP1; EVX1; NKRF; ZSCAN32; BCL3; NR1H2; SIX1; CERS4; CBX4; NR0B2; SMARCD3; IRF6; TULP3; SPDEF; NAB2; ELF5; DRAP1; ESRRG; TRIP11; TCEA2; NFIC; MYBL1; GTF2A2; ZBTB7A; HAND2; ZNF335; LDB1; SRCAP; HBP1; ETS1; COPS5; AHR; AR; SP100; ESRRA; SUPT4H1; GLI1; ARNT2; TEAD3; RYBP; NFE2L3; ERCC2; MLXIP; KDM4C; ACTL6B; WWTR1; PIAS1; CCNH; IRF1; RBFOX2; ZNF91; TGFB1; CD3D; ZNF12; HOXD3; ELF3; TAF12; TERF2; TRPS1; HHEX; THRA; CBFA2T3; LHX6; SUPT5H; CDIP1; E4F1; SIRT2; WT1; CBX7; MEN1; TOB1; CALR; NR3C2; ACTL6A; CNOT3; TBX10; ZNF556; IRF9; ZBED2; TERF1
Down-regulation	274	USP22; SUV39H1; NFKBIA; GABPB1; ATF1; TCERG1; SMARCA4; ZMYND11; SMARCE1; NR2F6; GLI2; ADNP; HNRNPD; PUF60; BRCA1; NUP62; BATF3; MLLT10; PATZ1; NSD1; CBFB; NRIP1; BPTF; ZNF236; SOX2; SMAD3; FOXO3; PHF2; WDHD1; ID4; PMF1; SALL1; ZFP64; HDGF; RFX7; TADA2A; ZEB2; SMARCC1; USF2; ZBTB1; GTF2I; BAZ2B; MED1; RXRA; ZNF672; MDM4; URI1; DDX17; CARHSP1; TCF12; MTA1; CBX5; CCNA2; PCGF2; AEBP1; GATA4; GABPA; ORC2; KAT7; WHSC1; BAZ1A; BCLAF1; RFXAP; E2F3; ZNF764; KLF3; SETD2; BRD3; ZNF292; ZNF516; CHD3; ZNF614; ZBED1; RBBP4; PCBD1; ZKSCAN7; ASCL1; ZFP69B; TAF9B; HMGB3; SMARCA5; NCOR2; RREB1; BRIP1; UBE3A; ZNF146; PARP1; RCOR3; LHX2; TAF11; SUV39H2; ZNF177; ZNF189; ZNF227; NCOA6; ZNF480; CREBZF; NONO; DDX5; HDAC6; CENPF; RHOA; EWSR1; TP53; SP3; YAF2; HEY1; MED7; SFPQ; ZSCAN12; SCMH1; PKNOX1; SMARCD1; NRF1; ZNF24; DEK; CNOT6; EZH2; BRD7; FOXM1; ZBTB14; HMGB2; SUPT3H; ZNF282; REPIN1; HDAC2; BCOR; RNF138; ZFY; PLAG1; ZNF84; LIMD1; RBM14; NCOA4; JARID2; ZBTB38; TGIF2; ZFP30; ZNF711; ZNF493; ARNTL2; NPM1; BAZ1B; ENO1; TBL1X; SSRP1; ZNF302; DNMT3B; CBX3; NFRKB; ING3; HMGA2; ZMYM2; MED6; TBL1XR1; ZNF134; TFDP1; MED24; PIAS2; CTBP1; HMGXB4; AATF; STAT5A; ZNF45; VEZF1; ZNF510; NFYB; MGA; MAGED1; NR1I2; ETV4; TFCP2; ZNF7; ZNF813; SP1; DACH1; SP2; CARM1; ZNF140; VGLL4; ZNF783; SMAD4; SALL2; TCF4; RFX5; PRRX1; BRWD1; ZBTB24; ISL1; ZNF532; PCGF3; PBRM1; SIX2; ZNF226; HCFC1; ZNF184; UBP1; ZNF248; ZNF22; MYBL2; POU3F2; EED; ABL1; HCFC2; NHLH2; NR1D2; CTCF; TRIM27; KDM2A; BRPF1; CDK8; HMGN3; FOXL2; BMI1; PGR; SMAD2; KDM4A; ZNF675; PSMC3IP; UBTF; HOXC6; RNF14; APEX1; MYCN; ZSCAN31; NCOR1; ZNF552; PQBP1; GTF2IRD1; SMAD6; HOXA11; FUBP1; BRD8; KDM5B; ASH2L; PMS1; TRAK1; IRF4; ELF1; SNW1; NANOG; ZNF93; ZBED4; SETDB1; STAT5B; YBX1; PRDM10; TRIM16; NCOA2; TTF1; EYA1; HSF2; KMT2A; NAB1; PBX3; LPIN2; RARB; WDR77; ZNF652; PURA; LZTS1; POLR2A; SMAD5; EP400; CDYL; OLIG2; PSPC1; ID3; CNOT2; DDX54; ZNF529; KDM5D; MEF2A; ZFX