Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID80781 Trichostatin-a GSE92742 NPC Human 24h 10uM EID0482
Types Number Response transcription factors
Up-regulation 264 FOS; JUNB; DRAP1; FOXO4; PPARD; FOSB; CREB3L2; CREG1; NR4A1; TOB1; ATF3; NR4A2; HDAC5; SND1; MEF2D; SETD3; EGR1; ZNF576; SPIB; NOC2L; CEBPA; ZBTB7A; LYL1; GTF2A2; ZNF593; SNAI1; SIRT7; JUN; DBP; ZNF778; MEF2C; APBB1; CDK7; CITED2; KMT2D; STAT1; CRYM; DLX4; NKX6-1; RUVBL2; LHX6; TOX4; SAFB2; CCNE1; SUPT5H; SERTAD2; MED15; PPP1R13L; TSC22D4; ZNF205; ZNF224; LDB1; GTF2F1; SRF; ATF6; ERCC2; CBX6; ZNF324; CEBPE; OSR2; ZNF331; PIAS1; EHF; KDM5A; MTF1; TGFB1; CALCOCO1; MAFK; SNIP1; KLF1; RXRB; ID2; YWHAB; MXI1; IRF3; TBX10; KDM4C; TAF12; GATA2; ACTL6B; BCL3; SMARCA2; ELF5; MLXIPL; KLF6; PITX3; WWC1; ZNF212; MLXIP; SAP130; MNAT1; FOXC1; NEDD8; PRDM12; HAND2; HNF1B; TCF15; HOXC8; PURA; TCEA2; SMARCD2; TEAD3; DDIT3; ZNF556; RUNX3; CCNC; MBD1; RELB; JUND; ZKSCAN3; ZNF335; PEG3; ZBTB48; BRD2; ZNF408; CDK9; SUMO1; TBX19; MBD2; TAF1; POU2F2; EVX1; BAZ2A; KLF13; HDAC1; HHEX; FEV; CRK; HTATIP2; TULP1; CEBPB; SSX3; ETV6; HOXB1; SIRT2; FOXJ1; DYRK1B; LMCD1; ASCL3; CBX7; IRF6; KLF2; IRX5; ALX3; SIX1; EPAS1; HDAC11; ARNT; SIX5; ZSCAN5A; PROP1; SIN3B; CSDC2; TLE2; MED20; NFE2; NAB2; MYOD1; MYT1; LMX1B; MNX1; HIVEP2; ZNF394; NFIC; NPAS1; TBP; SATB2; HOXA3; PBXIP1; HMX1; SNAPC4; GATA1; GBX1; MAP3K10; PRDM8; SUPT4H1; HABP4; ZFHX2; BARX2; MAX; NR4A3; EMX1; ZNF768; RFX2; ZSCAN2; MXD1; CTR9; PHOX2A; ZNF175; AIRE; ZHX3; CBFA2T3; SOX10; PCGF1; TRIP4; NCOA3; ATOH1; TFAM; RNF141; THAP3; PITX1; VGLL1; HINFP; ESRRA; USP16; NR0B1; TBPL1; MAFG; CBX4; NR3C2; PIAS3; NR5A1; NFIL3; MYT1L; TSC22D2; LHX3; PSMD9; TAF1C; KLF15; MYCBP; RBBP5; ZBTB43; PTRF; DNAJC1; MED27; NFKBIB; NFAT5; HNF1A; YBX2; ALX4; BRF2; BRD4; CDC5L; TAF10; PREB; ZNF573; MED23; PRPF6; KLF9; KLF5; RCOR1; SP110; EZH1; OVOL1; KMT5A; HBP1; HEYL; GFI1; ARNTL; HOXA1; INSR; ZNF160; KMT2B; MLX; NR1D2; ZBTB20; ZBTB17; ING1; AATF; RUVBL1; SIX3; EGR3; UBE2B; NFATC1
Down-regulation 435 SOX11; HMGA2; ADNP; TGFB1I1; TP53; ZEB1; APEX1; SALL2; MECOM; SMARCA4; SCMH1; TCF12; EYA1; PHF2; KAT2B; ZNF43; IFI16; GABPB1; BPTF; SMARCC1; TCERG1; SALL1; ZMYND11; SOX2; TFDP1; ZNF532; NCOA2; FOXM1; ERBB2; ZNF675; HNRNPD; ISL1; HOXB6; SOX17; PCBD1; ZBED1; RBBP4; HMGXB4; NR2F6; SP3; NFKBIA; ZHX2; CTCF; EZH2; ZNF85; DEK; NRIP1; HMGB2; ZFY; ZNF512B; CNOT2; PATZ1; BRIP1; LIN28A; LEF1; ZKSCAN7; ZFP69B; ZNF32; HMGN3; ZNF134; YEATS4; ZNF711; ZFP37; ZNF253; ZNF292; VGLL4; ZFP30; CBX5; ZNF141; BCOR; ZNF22; MYB; ASCL1; DPF2; PBX3; ZIC3; BAZ2B; FOXF1; ZNF492; ID4; TSC22D3; ZNF682; CBFB; TAF9B; BACH1; WDHD1; TLE4; HES1; HOXB2; RFX7; SOX3; ZFP64; SFMBT1; ZNF254; USP22; ZFPM2; TCF3; HDAC2; ATF1; TGIF2; ZNF273; ZNF467; BRD7; CHD9; ZNF710; SUV39H2; RLF; ETV1; PRMT2; ZSCAN12; MBD4; ZBTB6; PBRM1; SMARCE1; HOXB5; PITX2; TBL1XR1; TAF1A; ZNF74; MED17; ZNF107; TOX3; MEIS1; BRWD1; FUBP1; WDR77; BCL11A; REPIN1; HOXB9; MED13; VEZF1; CEBPG; ZNF180; ZNF140; CUX2; ZNF695; RFX5; SSRP1; RNF138; AEBP1; RBM14; LHX2; RSF1; LOXL2; NCOR2; NUP62; SUPT7L; ZNF93; YAF2; ZNF334; DACH1; LZTS1; CREBZF; PUF60; ZNF629; CTBP1; NFYB; TBX1; ZNF189; ZBED4; PBX1; TBL1X; ZBTB3; PRDM1; KAT2A; BRCA2; ZNF529; DDX17; ASXL1; CCNA2; SMAD4; ZKSCAN8; ZBTB1; THAP9; ZFP2; SOHLH2; BCLAF1; ZNF239; EMX2; ZNF236; NFKB1; SUV39H1; ZBTB14; PMF1; ZFX; STAT5B; STAT6; ZNF112; PRDM10; TRAK1; PHIP; WIZ; OLIG2; ZNF234; CENPF; PEX2; ZNF208; FOXO1; HOXA2; ZNF83; BATF3; TCF4; DDX5; NCOR1; FOXN2; BNC2; ZNF672; TAF1D; PLAG1; ZBTB39; YAP1; SOX5; HIPK3; ZNF282; ZNF606; PCGF2; PLAGL1; MLLT10; HDAC9; ZNF783; MYBL2; ZNF227; GLI2; RCOR3; HMGB1; ZNF135; ZNF423; SETDB1; ZNF24; AFF2; RAN; ZNF232; RBM39; ZNF146; UBE2L3; UBE3A; FLI1; CARF; CHD7; GTF3A; SIX2; TGIF1; RREB1; SLC2A4RG; ZNF552; CREBL2; PKNOX1; HIVEP1; CREB5; ZNF764; RXRA; CBX3; ETV4; URI1; TRIM22; PARP1; ZNF614; ZNF33B; ZNF415; CREB1; GCFC2; GABPA; CDK8; HIC2; SETD2; ZNF516; TCF25; TFEC; HOXC10; ZEB2; JAK2; ZNF248; GTF2I; HDGF; SIM1; ZNF493; XRCC6; RFXAP; ZNF202; NCOA4; TRIM16; BMI1; ZNF835; GLI3; E2F3; HMGB3; ZSCAN16; ZIC1; ZNF623; E2F5; PIR; ZFP36L2; ZNF136; FOXN3; ZNF268; WHSC1; ZNF770; TRIM24; ZNF84; CARHSP1; SP2; PLAGL2; NAB1; MYCN; ZSCAN31; IRF2; MYC; KAT7; SMAD1; PMS1; BAZ1A; ZBTB24; CNOT6; TADA2A; ZNF302; ZBTB38; MEOX2; ZNF551; ZNF813; ZFHX4; ETV5; PSIP1; ZMYND8; ZFP36L1; RBL1; BRCA1; ZNF177; REL; RXRG; EED; SPEN; IRX4; TCEA1; ZZZ3; ARL2BP; MEIS2; SAP30; NR2C1; BCL6; JARID2; CHD3; CIITA; CLOCK; HOXC6; ELK4; POU5F1B; TCF7L1; ZNF7; TRIP6; KAT8; TOX; PRRX1; HEY1; E2F2; THAP1; SMARCC2; GTF2IRD1; NR1I2; XBP1; ALX1; HIF1A; VPS72; FOXF2; BRD3; HOXB7; FOXE1; TLE1; MAML1; KLF3; ZNF14; MGA; SMAD6; ZNF219; HAND1; YEATS2; SATB1; GATA6; BACH2; CNBP; HIPK2; AES; MDM4; PKNOX2; SP1; TRRAP; PSMC3IP; NFE2L1; SP140L; CERS6; LPIN2; RBPJ; ARID5B; NANOG; HOXD11; AGO2; TTF2; SMARCA5; RBFOX2; ZNF91; ZNF217; ZNF184; NFX1; ZNF226; NONO; ZNF652; PSPC1; SOX12; ARID1A; CTBP2; FHL2; THAP10; NKX3-2; ATN1; ZNF528; ELF2; ZNF131; ING3; NPM1; ZNF443; ZMIZ1; ZNF195; ZNF329; TAF9; HMG20A; ZNF117; PCGF3; MKL2; L3MBTL1; REST; YBX1; UBP1; RARA; CUX1; DMTF1; FOSL2