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Overview Perturbagen Expression Profiles Transcriptional Responses
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Overview Perturbagen Expression Profiles Transcriptional Responses
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Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID80658 Trichostatin-a GSE92742 NPC Human 24h 10uM EID0481
Types Number Response transcription factors
Up-regulation 270 CREG1; PPARD; SPIB; FOXO4; JUN; GTF2A2; ZNF593; FOSB; EGR1; DRAP1; FOS; CEBPE; ATF3; JUNB; SIRT7; PIAS1; LYL1; CRYM; CERS4; NFIL3; ETS1; COPS5; MEF2C; SETD3; RUVBL2; CTR9; PPP1R13L; CITED2; MEF2D; ZNF324; BRF2; EVX1; SP100; STAT1; SERTAD2; LHX6; EMX1; RBBP5; DDIT3; SNIP1; ERCC2; HDAC5; CDK7; SMARCD2; CALCOCO1; TBPL1; IKBKAP; PROP1; APBB1; TCEA2; ZNF350; SND1; PSMD9; TAF4B; ATF6; ZSCAN5A; ZNF576; SP110; MYCBP; IRF3; DLX4; ELF3; SIX5; HOXD1; ECD; NFE2; NOC2L; MED31; TCF15; PBXIP1; PRDM12; NR4A2; SUPT5H; ZNF205; HINFP; CBX6; ALX3; ZNF331; ZNF224; HHEX; BRD4; MED23; PITX3; ASCL3; NR5A1; MTF1; NR4A1; HCFC2; IRF6; NOCT; CBX7; THRB; OVOL2; TOX4; ZSCAN32; HOXC8; TSHZ2; OSR2; TERF2; NCOA3; MSX1; TRIP11; ZNF212; LMCD1; HDAC7; RELB; HOXB1; C1D; TFAM; TOB1; MED15; TRIB3; MED20; YWHAB; ZNF335; MLX; ESRRA; CCNC; CDC5L; ZNF771; TCF7; ZNF507; SNAPC4; NKRF; SIRT2; JUND; MED27; POU2F2; GATA1; INSR; LZTR1; TSC22D4; HAND2; NR0B2; TRIP4; TSG101; SRCAP; PIAS4; NAB2; ELF5; ZNF175; CCNE1; HMX1; EGR3; ZNF556; VDR; ZBTB17; SNAI1; CBFA2T3; GTF2F1; MED25; MAFK; IRF7; KLF1; USP16; CEBPB; TBP; ZNF444; HIVEP2; DBP; NR3C2; ZNF410; EHF; FOSL1; KLF6; NR4A3; THAP3; NR1I3; CEBPD; ZNF408; CEBPZ; MAFG; HABP4; FOXJ1; EPAS1; RCOR1; TFAP2A; SAFB2; BCL3; HDAC1; STAT3; RNF10; TSC22D2; RUNX1; CRK; PCGF1; RUNX3; TAF12; ZNF557; PAX5; ZBTB7A; CREB3L2; CREB3L1; HTATIP2; ACTL6B; NR1H4; MLXIP; IRF8; ZBTB48; ZNF768; MYOD1; BTAF1; TAL1; SIX1; FOXC1; VGLL1; CALR; NR0B1; MMS19; ZNF304; BBX; SMARCA2; NEDD8; ARID5A; ING4; TEAD3; ZBTB20; MAK; PTRF; KLF2; ZNF263; PRPF6; ETV6; ACTL6A; TGFB1; RYBP; MTF2; PHF8; MLXIPL; MXI1; PURA; UBE2B; NRBF2; LDB1; BRD2; TFCP2L1; SIX3; AHR; ZNF160; EGR2; HOXA11; TAF10; ZNF573; CCNH; MNDA; JUP; PAWR; HOXA1; BHLHE41; CDIP1; DNMT1; KMT2D; CSDE1; TLE2; HOXC10; TULP3; NFIC; STAT5A; PREB; WWC1; FOXK2; NFAT5; MYBL1; PA2G4; HOXA10; SOX9; POU4F1; HBP1; ZNF165; SOX10
Down-regulation 425 ERBB2; TP53; SOX2; SMARCA4; HMGA2; PCBD1; GLI2; ZNF43; SOX11; TCERG1; ETV1; ZMIZ1; LIN28A; NUP62; SMAD3; ZKSCAN7; ATF1; ADNP; TAF9B; NR2F6; ZNF532; PATZ1; RFX7; NCOA2; SALL1; ZEB1; DEK; NFKBIA; BPTF; DMTF1; EYA1; BRIP1; MYCN; KAT2B; ZIC1; ZNF84; WHSC1; LEF1; PHF2; SMARCE1; STAT5B; ZNF423; SCMH1; ZMYND11; PBX3; HDAC2; NCOR1; ZBED1; PITX2; HOXB2; BMI1; CBX5; TGFB1I1; ZNF253; REPIN1; ZNF24; MEIS1; ZMYM2; RBBP4; GLI3; TCF4; ZNF292; HMGB1; HNRNPD; XBP1; ZNF287; ID4; BAZ2B; GTF2IRD1; LZTS1; TGIF2; VEZF1; CBFB; GABPB1; ZNF22; CTCF; TSC22D3; NRIP1; SALL2; PBX1; ZNF32; HMGB2; HOXA2; ZNF493; ZFP69B; VGLL4; PMF1; BCLAF1; ZNF711; POU3F2; CREB1; ZNF134; ZIC3; TADA2A; CHD3; ZNF236; ZNF467; ZNF282; MLLT10; FOXF1; HDGF; HOXB9; PARP1; ZFP2; ZNF189; DDX17; CTBP1; ZBTB1; HMGN3; TBL1X; SUV39H2; USP22; ZNF783; ZNF248; ZBTB38; HMGB3; E2F2; PKNOX1; ARL2BP; ZNF93; ZNF85; NCOR2; WDHD1; ZNF140; SUPT3H; RAN; POU5F1B; DEAF1; PLAGL2; OLIG2; TCF12; ZNF529; CCNA2; CNBP; HIF1A; ZNF528; ZNF273; NFKB1; PRMT2; FOXM1; TBX3; TOX3; ZFP64; BCOR; IFI16; KAT7; ZZZ3; ZNF629; ING3; ZBTB6; BRWD1; ZKSCAN8; SP3; TRIM24; EZH2; TRIM22; ZNF516; ZBTB14; RNF138; CARHSP1; BRD7; TRAK1; E2F5; CENPF; RFXAP; YAF2; PBRM1; YEATS4; RCOR3; TRRAP; THAP10; CERS6; NONO; ZNF512B; CUX2; NANOG; GTF2I; ZHX2; FUBP1; ZNF254; NHLH2; CHD9; CREBZF; GTF3A; ZNF33B; CNOT2; ZEB2; RSF1; HEY1; CARF; ZNF107; THAP9; WIZ; HIPK3; UBE3A; PCGF2; ZSCAN12; CAPN15; SOHLH2; KDM2A; SSRP1; DDX5; CBX3; PUF60; RBL1; FOXN3; MECOM; SMARCA5; ZNF239; RBM39; TADA3; ZNF480; ZNF334; EHMT2; ZNF208; ZFY; TAF1A; ZFP30; PCGF3; TGIF1; ZNF302; SUV39H1; DNMT3B; SUPT7L; ALX1; SOX17; BCL11A; DACH1; ZNF672; UBE2L3; BRD3; ZNF606; ZBTB3; NCOA1; ZNF141; NEUROD1; MED17; RFX5; TRIM29; ETV4; SLC2A4RG; RBM14; USP21; HIC2; ZNF675; PRDM1; PQBP1; YBX1; SIX2; REST; ZFX; ZNF74; JARID2; BATF3; NAB1; LHX2; NFYB; KAT6B; PSIP1; LHX1; APEX1; TLE4; ZNF227; TWIST1; SOX3; E2F3; ZNF329; FLNA; BRCA2; FOXN2; ISL1; MYBL2; PLAGL1; PMS1; HMGXB4; TBL1XR1; MED4; GATA6; BRCA1; ZNF813; SATB1; PLAG1; BAZ1A; TFDP1; ASCL1; EBF2; FOXG1; MBD4; MDM4; VPS72; RLF; SETDB1; ZNF614; C1QBP; RNF4; ZSCAN31; ZNF83; SOX5; GABPA; NFATC4; STAT6; AEBP1; ZNF623; NR2C1; SMAD5; SPEN; NFX1; MYC; ZFPM2; SAP30; PSMC3IP; ZNF202; UBE2I; SMAD6; YAP1; PAX6; ZNF652; CREBL2; ZNF146; ABL1; RXRA; ZNF415; SOX4; RB1; NR1I2; TCF7L1; WDR77; ZBED4; FHL5; RARB; MTDH; ZMYND8; HIVEP1; ATN1; SFMBT1; PEX2; CDK8; BACH1; URI1; NPM1; HOXB6; PKNOX2; RXRG; NKX2-2; INSM1; TTF1; CHD7; SMAD4; ZNF232; GMNN; RARA; TDRD3; PPARGC1A; BCL6; PTTG1; WWTR1; FOXA1; KLF3; RREB1; ZNF7; DPF2; KDM5B; ZNF219; FOXE1; UBP1; WWP1; HOXB5; LIMD1; BRD8; RBL2; CDX2; HIPK2; ZNF131; POLR2A; PNRC1; HSBP1; TCF25; MAFB; CTBP2; SIAH2; ZSCAN16; MEIS2; RBFOX2; ZNF552; ID3; KAT2A; TRPS1; RBBP8; GATA4; NR2F1; LPIN2; THAP1; TOPORS; CEBPG; HSF1; SMAD1; ZKSCAN1; TRIM28; ZSCAN9; BNC2; MYB; MNT; MAGED1; KDM5D; DNAJC1; FOXF2; SSBP2; HIRA; PHF20; LOXL2; NFE2L1; BASP1; TBX1; TFEC; BCL11B; CTNNB1; ETS2; HES1; TSC22D1; XRCC6; PRRX1; ELK3; EED; SMARCC2; ATF4
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