Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID80144	Trichostatin-a	GSE92742	NEU	Human	24h	10uM	EID0477

Response Information :

Types	Number	Response transcription factors
Up-regulation	167	CREG1; NOC2L; ZNF205; EGR1; SPIB; CEBPE; CCNC; TFAM; ZSCAN2; NFIC; THAP7; ATF3; IRF3; CREB3L2; ZNF768; TEAD3; AIRE; NR1I3; CDK2; SUB1; PPARD; DRAP1; SUPT5H; CITED2; OVOL1; SETD3; SIRT7; DBP; CDK7; JUN; CRYM; FOS; MED25; POU2F2; MYCBP; TONSL; ATF6; PROP1; NKX6-1; HNF1A; HOXA3; MAFK; TCFL5; HOXA6; RBBP8; TBP; SSX1; ACTL6A; NEDD8; SIX5; NR0B1; HMG20B; RELB; ESRRA; KMT2D; YWHAB; ITGB3BP; ZNF593; TBX21; TBX19; MLX; THRAP3; EVX1; MEF2D; PURA; PRDM12; TAF4B; BRD4; CALR; ONECUT1; SOX9; MYBBP1A; MXI1; HHEX; TCEA2; OSR2; NFKB2; IRF1; ABT1; CHAF1B; HTATIP2; TOX4; TRIM25; SUPT4H1; KLF2; TULP2; JUNB; THAP3; INSR; PA2G4; DOT1L; MEF2C; JUND; ERCC2; ZNF335; NR0B2; ZNF556; LZTR1; NFATC3; BARX2; NKX3-1; ETV5; ARRB1; SND1; RNF141; GTF2A2; NR3C2; COPS5; LHX6; OVOL2; CCNE1; HMX1; MLXIPL; WT1; LHX3; ING4; MED15; PIAS1; ZBTB32; ZNF143; HOXC8; HES1; FOSL1; KLF6; PAWR; CDK9; ZNF576; RUVBL2; RFX2; FOSB; CTR9; TULP3; NFKBIB; CXXC1; NR5A2; PHF1; GTF2F1; MNAT1; BRD2; RNF14; TLX1; AR; VGLL1; C1D; SNAI1; PTRF; E2F4; HDAC1; RBBP5; LMCD1; EPAS1; E4F1; SAFB2; HIF3A; IRF5; YBX2; HOXA4; ZNF224; ECD; KDM4C; DDIT3; TAF10; RBPMS; CCNH; PBXIP1; PHF8; URI1
Down-regulation	337	SMARCA4; ZMIZ1; MTA1; ZNF532; ADNP; SMARCC1; TOX; BAZ2B; ZNF292; EYA1; FOSL2; SMAD3; REPIN1; TSC22D3; KAT6B; RUVBL1; ZNF146; NCOA2; PHF2; DLX5; NFKBIA; VGLL4; ZNF529; BCOR; RREB1; PATZ1; ZKSCAN7; BRD7; ZBED1; ARID1A; MYCN; TRIM24; ZNF189; ZIC1; ERBB2; TGIF2; SP3; CHD3; ZEB1; SALL1; ZNF84; CUX2; KDM5B; SALL2; TCF3; GTF2IRD1; BPTF; MAML1; ZFP64; SMAD7; STAT6; E2F5; RFX7; TRRAP; KMT2A; TBL1X; DACH1; CTCF; TRAK1; TP53; BRWD1; ZNF33B; PHF20; ZMYND8; HMGB2; LHX2; RAN; MGA; ZHX2; ISL1; ZNF629; RARA; ZNF512B; SOX12; NCOR2; CENPB; CTBP1; AGO2; ZNF248; SFPQ; CUX1; PLAGL2; FOXO3; YEATS2; BRD3; BCL11A; MNT; SREBF2; TCERG1; CENPF; SCMH1; OLIG2; PLAG1; WIZ; TLE1; JARID2; NFYB; ZFX; NUP62; ZNF282; HNRNPD; CREB1; PCGF2; SCAND1; LZTS1; ZNF711; VEZF1; NHLH1; ZNF160; TCF7; ZNF3; HMGB1; ZNF536; NHLH2; ZNF562; PUF60; ZNF202; EBF2; ZNF273; VAX2; UBE3A; LIN28A; ZEB2; RLF; ZMYND11; GLI2; DDX17; ZNF140; ATF7IP; ZNF423; RBFOX2; CNOT2; FOXO1; SSRP1; HDGF; ZMYM2; PBX1; ZBED4; SUPT7L; ID3; HMGB3; BCL11B; CBX5; NFIL3; ZNF107; MECOM; PRMT2; E2F3; KLF3; NR2C1; ZNF506; GABPB1; ZNF134; NRIP1; INSM1; TRIM33; DDX5; HMGXB4; NCOR1; ZBTB14; TCF20; PLAGL1; MDM2; RFX5; ZNF93; ZFHX3; RBM39; JAK2; ZFP36L2; ID4; HIPK3; SSBP3; ZBTB38; RSF1; ZSCAN12; ZNF334; ZNF253; MYT1L; SMAD4; HDAC2; PCBD1; RNF2; DMTF1; ZNF236; CNOT6; ZIC3; ESRRG; SOX17; KLF7; HIVEP1; UBE2I; AFF2; ZBTB1; COPS2; RBM14; CTBP2; ING3; ZNF268; ARID3B; FOXM1; SIM2; PKNOX2; TCF25; TCF12; GRHL2; ZNF208; RCOR3; ZNF611; BCLAF1; REL; ZNF43; NFE2L1; BAZ1A; PHOX2B; USP22; PCGF3; EYA2; CAPN15; ZNF710; KDM4A; HMGA2; ZNF510; ZNF135; ZNF83; HOXD3; ZNF764; ZNF74; UBTF; SMARCE1; ZNF44; NKX3-2; ERCC3; ZNF721; PHIP; SIM1; ZBTB3; SUV39H1; ARID4A; TBL1XR1; ZNF141; BRIP1; HIC2; CAMTA1; DNMT3B; MED13; PQBP1; NANOG; PBRM1; HMGN3; TAF1D; CTNNB1; DPF2; KAT7; EGR2; PRRX2; TSC22D1; GLI3; CBFA2T2; HEY1; TWIST1; ZNF672; RXRG; DNAJC2; NAB1; GTF3A; IFI16; XRCC6; EN1; NCOA6; TRIM16; ZNF467; HSF1; ST18; ZNF516; ZNF254; TCF4; ATF2; ZFP69B; CCNA2; HMBOX1; ZNF302; SMAD6; ATN1; MYB; ZNF606; STAT5B; MTF2; LEF1; ZNF16; ZNF7; TFCP2L1; CDK8; SETD2; CNBP; PROX1; MAZ; MEOX2; TBX1; NCOA1; CBX3; EP300; ZNF329; ELK4; HOXD10; PRDM10; POU5F1B; CHD7; SUPT3H; PEX2; PMF1; ZNF217; ARID3A; NPAS2; TGFB1I1; TRIM22; PPARGC1A; TLE4; ZZZ3; RNF138; NR2F6; CBFB; PKNOX1; KAT2B; ZNF652; ZNF24; FOXI1; TULP4; CARHSP1; BACH2; ZBTB24; FOXN3; ZNF184; RBBP4; ZFPM2; WDR77; UBP1; BARX1