Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID79888	Trichostatin-a	GSE92742	NEU	Human	24h	10uM	EID0475

Response Information :

Types	Number	Response transcription factors
Up-regulation	174	RUVBL1; EGR1; FOS; GTF2A2; MYCBP; CRYM; STAT1; ITGB3BP; FOSB; NOC2L; ATF3; CDK7; SIRT7; IRF3; SUPT4H1; ATF6; GTF2F1; MLX; TFAM; ZNF205; MEF2D; HOXA5; SIX1; PPARD; TBX21; NKX3-1; NFIC; SUB1; CREG1; ERBB4; PIAS1; RUVBL2; NEDD8; TAF7; FHL2; CTR9; FOXC1; CCNC; HOXA10; MAFK; TOB1; RNF6; HES1; JUNB; DBP; DDIT3; ZSCAN2; EPAS1; ANKRD1; SETD3; ZNF45; KLF2; SIX5; NFKB2; SNIP1; ECD; ZNF224; RXRB; MNAT1; AIRE; WWC1; MEF2C; NR0B1; NR4A1; ZKSCAN3; NR1H2; ZNF394; TDP2; TEAD3; HLTF; ALX3; CHAF1B; CITED2; MAX; ESRRA; PURA; ZNF692; ZNF593; TULP2; ZNF576; SMARCD2; SND1; ZNF556; NR3C2; NR2F1; TSC22D4; ACTL6A; ZSCAN32; PAX5; HOXA6; DRAP1; ZNF324; EVX1; PBXIP1; ETV5; C1D; FOXJ1; SSX3; MYBBP1A; KMT2D; THAP7; ZNF696; HOXA4; PROP1; TCF15; SMARCA1; CREB3L2; JUN; CDK9; SAFB2; PPP1R13L; ERCC2; TBX19; MED15; WWTR1; CDK2; SREBF1; HOXC8; UBE2B; RBBP5; HOXA3; OSR2; BRD4; SPIB; BLZF1; HDAC7; CALCOCO1; FOSL1; LZTR1; CEBPE; FOXO4; HMG20B; MEOX1; NFIB; VGLL1; HOXC10; TCFL5; RBPMS; SUZ12; BARX2; YWHAB; WT1; TAF10; C1QBP; CALR; CRK; TBP; HNF1B; MXI1; HDAC1; SUPT5H; NAB2; RNF141; IKBKAP; RB1; TGFB1; HHEX; IRF7; MED21; ABT1; CCNE1; POU2F2; SP110; MBD2; STAT2; PA2G4; CCNT1; SP100; HOXA7; CBX6; MTF1; EED; LHX6; SOX9
Down-regulation	340	KAT6B; SMARCA4; ZNF532; ZMIZ1; SMARCC1; PATZ1; BCL11A; LIN28A; ADNP; VGLL4; CTCF; BAZ2B; ZMYM2; CUX2; BRD3; FOXM1; SMAD3; ZEB1; REPIN1; NFKBIA; ERBB2; CARHSP1; BCOR; SALL1; BRD7; PUF60; TSC22D3; KDM5B; ZHX2; ZNF93; ZNF711; ZBED1; GTF2IRD1; ZNF85; ZNF629; NR2F6; HMGB2; PSPC1; HMGA2; ZFP36L2; ZIC3; CHD9; SP3; PHF2; HNRNPD; SALL2; HIC2; NCOR2; DPF2; TRAK1; EYA1; BPTF; ZNF43; MYB; MYCN; ZNF292; CBX5; CCNA2; NHLH1; RFX7; FOXO3; NHLH2; RLF; ZKSCAN7; MKL1; ZNF675; TCF25; NR2C1; MYRF; NCOR1; LEF1; NAB1; ISL1; ZNF710; NFYB; LHX2; RREB1; ZFP69B; FOSL2; APEX1; SCMH1; ZNF248; ZFP64; KLF3; NCOA2; HEY1; KAT7; ZEB2; SREBF2; JAK2; ZNF253; DACH1; TCF12; RSF1; FOXN3; UBP1; ZNF202; ZMYND11; ZNF254; WHSC1; ZNF146; ZNF282; SSRP1; PQBP1; GLI2; HDGF; RARA; E2F5; HIF1A; ZBED4; POU5F1B; DDX17; PITX2; CTBP1; GABPB1; AFF2; UBE2I; ZFY; STAT6; ZNF33B; SIX2; CHD3; ARL2BP; TLE4; VEZF1; SMARCE1; ZFX; SOX17; ZFHX3; SSBP3; MED16; PHIP; GTF2I; RBBP4; HAND1; ATN1; ARID4A; ZNF273; PMF1; NUP62; RCOR3; SFPQ; DMTF1; SOX3; ZNF140; ZNF516; TGIF2; FOXF1; TCERG1; MAML1; ZNF764; ZNF84; DLX5; PRMT2; MLLT10; HIPK3; WIZ; ZMYND8; TCF3; HOXB2; HDAC2; ZNF219; EHMT2; TRIM24; HOXB6; SETD2; NKX3-2; ZNF334; RFX5; DCC; ZNF208; BAZ1A; ZNF141; GLI3; PARP1; ZNF529; ZNF236; ID4; HIPK2; MGA; TCF4; NEUROD1; FOXA2; PKNOX2; ZKSCAN8; HMGB3; FOXO1; REL; ZNF423; ZSCAN12; ZNF189; ZBTB14; KAT5; RXRA; HIVEP1; NANOG; ARID1A; INSM1; CNBP; KLF7; PRDM10; TBL1XR1; YAP1; YY1; ATF7IP; SMAD4; BCLAF1; CREB1; ASCL2; HIPK1; TCF20; MTF2; NRIP1; ZNF682; SOX12; POU4F2; PAXBP1; HDAC4; PEX2; SMARCB1; PLAGL1; ZNF32; ZNF606; CSDE1; RBFOX2; ZBTB1; MYT1L; SIM1; POU2F3; CDX1; BRWD1; NFIL3; BRIP1; SOX5; SP2; SAP30; BTG1; GRHL2; ZNF721; MAZ; PHF20; TADA3; CUX1; HMGB1; ST18; PBRM1; NFYC; BASP1; ZNF24; TOX; ATF4; RXRG; TGFB1I1; CEBPG; TULP4; CTNNB1; RBM14; CENPF; OLIG2; CTBP2; KAT2B; SMARCA5; ZIC1; TBL1X; ARID4B; ZNF3; CHD8; TCEB2; NFE2L1; TRIM29; HMG20A; STAT5B; RFXANK; ZBTB24; ELF2; PCBD1; BCL11B; ZNF117; CNOT2; SPEN; TBX1; ZNF688; AEBP1; RBM39; MNT; BACH2; TCF7L1; TP53; ZBTB39; FOXI1; ZBTB3; JARID2; SUV39H1; ALX1; GTF3A; YEATS2; ID3; SOX11; SUPT7L; TAF9B; YAF2; ZNF611; KMT2A; TFEB; PKNOX1; HIRA; NSD1; PCGF3; PLAG1; NFATC1; RNF138; UBE3A; HOXB5; EMX2; AGO2; PBX3; HOXB9; PLAGL2; WDHD1; HMGN3; TRIM28; WDR77; CBX3; PHOX2B; ZNF134; ZNF512B; CBFB; BATF; MBD4; PRRX2; ZBTB18; DEK; ZNF217; ZNF268; ZNF44; TLE1; DEAF1; HOXD3; CIZ1; ZNF22