Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID79297 Hydroxychloroquine GSE92742 FIBRNPC Human 24h 10uM EID0471
Types Number Response transcription factors
Up-regulation 140 EZH1; SMARCA5; YBX2; NKX2-2; FOXE1; ZNF208; ID3; ZNF778; IKZF1; NLK; MKL2; HEY1; ZNF652; HLF; PRRX1; SMARCA1; SOX5; EGR2; ZNF492; MITF; ZKSCAN8; BHLHE41; HOXB7; KMT2A; PLAGL1; EGR3; NR1H3; USF2; DDX17; GLI2; HIPK3; STAT2; NR2E1; ZNF443; ZNF264; SOX10; MYCN; TCF12; NR4A1; LZTS1; HIPK2; NEUROD6; BRIP1; NR1H4; TSC22D1; GATA3; LEF1; ZNF331; ZNF587; KAT2A; MECOM; MYB; DLX5; ZNF160; HOXD11; BATF; MBD4; RSF1; SOX3; NFE2L1; OLIG2; TSC22D4; NCOR1; TLE2; ETV5; SND1; NR4A2; NFAT5; IRF4; ZNF224; NCOA2; SREBF1; ZNF146; ZBTB38; HOXB6; ATN1; HLTF; MLX; ADNP; NR1H2; POU4F1; POU2AF1; NKX2-1; EYA2; PREB; MEN1; ELF3; NR3C2; ZBTB20; RELB; KLF9; ZNF91; FOSL2; TERF2; CUX2; NFATC1; TFCP2L1; SOX17; ZNF136; ZNF148; AEBP1; TWIST1; ZNF711; CALR; FOSB; ETS2; KAT7; ZNF226; TGIF1; TXNIP; PBX3; TCFL5; ZMYND11; TGFB1; PHIP; BACH2; SAP30; ERG; NR1D2; MYRF; ST18; ZNF165; ZIC1; TAL1; ZKSCAN1; ZFP36L2; ISL1; NFIL3; HHEX; ID4; SNAI2; SALL1; ID1; TOB1; ID2; HOXB2; MSX1; ATF3; PEG3; SATB2
Down-regulation 168 CREB1; PSIP1; CEBPD; GATAD2A; HIRA; CERS4; DACH1; ZNF45; ZMIZ1; BLZF1; ZNF432; RCOR1; RXRG; NRIP1; ZNF593; MAFB; EMX2; ZFX; CTBP1; ZNF250; KAT2B; ZSCAN12; CHD1; ARID4B; UBE3A; ESRRA; CERS6; HIPK1; KDM4C; SUB1; ZNF239; TLX2; PAX5; MED7; CNOT2; TAF5L; ARNT; VDR; RFX5; ZEB1; UTF1; NKRF; WWP1; ZNF35; POLR3F; TCEA2; MNDA; RNF138; TEAD4; IRF8; KLF4; AFF1; TRIM29; ZNF468; PHOX2A; HIVEP1; ZNF415; ZFP36L1; THAP10; EYA1; JUND; ZBTB7A; NR2F1; HOXC4; HOXD3; TAF11; SPEN; IRF7; RBM39; GATA6; TLE4; ACTL6B; PRDM12; WWC1; SIX2; ETV4; CRY1; PITX1; RBPJ; SETD2; TRAK1; PCGF2; HIC2; SSBP2; DBP; EP300; ELK3; AGO2; ARID3A; CREB3L1; MYCL; UBE2B; NFIB; PHF1; TCEB2; USP21; CCDC59; BAZ1A; KLF6; NFKB1; TBX3; ERBB4; SHOX2; CNOT6; TEAD3; MYT1; YEATS4; HLX; REST; ZFPM2; C1D; FOXN3; ZNF532; PHF2; SP110; YAP1; NR2F2; TRIP4; KDM5A; BCL3; ZNF32; TOX3; SF1; RUNX3; TCF7; NKX3-1; INSM1; IRF1; TRIM32; HOXB13; SOX9; LMCD1; HMGN3; KLF1; WWTR1; PIR; RNF4; THAP7; AHR; RCOR3; WHSC1; C1QBP; FOXM1; PHOX2B; JUP; SMAD6; JUNB; PHF20; MEIS2; SAP18; ZBTB18; ZNF83; ZNF423; IRF9; CBX6; TBL1X; BAZ2B; WNT4; FOXC1; TRIM22; TFAP2C; WT1; MYBL1; FOXD1; ELF4; SMAD7; HOXC6; OSR2