Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID79245	4-hydroxyretinoic-acid	GSE92742	FIBRNPC	Human	24h	10uM	EID0471

Response Information :

Types	Number	Response transcription factors
Up-regulation	374	GATA3; STAT2; RSF1; ZNF22; SMARCA5; IKZF2; WHSC1L1; NFIX; PLAGL2; SOX10; ELF3; RFX7; TCFL5; ZNF701; IKZF1; ADRB2; RBBP8; ZNF217; SOX5; TAF4; EGR3; DLX6; LZTS1; ZNF165; ZNF586; HIPK2; NCOA2; TTF2; CBX5; SSRP1; CCNE1; ZNF107; LIN28A; PIAS3; BAZ1B; ESR1; PRDM5; PPARG; IRF4; ZKSCAN8; ZNF273; BACH2; BRCA1; ZNF222; PGR; KMT2A; ZBTB44; HMGA2; MXD1; EGR2; FLI1; HNF1B; EGR1; IFNB1; EYA3; ZNF329; RB1; ZNF778; STAT5A; EZH1; ADNP; NR2C2; ZNF415; ZIC3; ZNF286A; SMARCC1; ZNF141; LEF1; BRWD1; CTNNB1; SOX2; YBX2; TRIM33; EP400; ARID3A; SP4; EED; TGS1; NR1H3; KDM5B; NSD1; ZNF695; AGO2; POU2F2; ZNF248; HSBP1; ZNF629; MYT1L; TCERG1; TAF12; ZNF331; TULP4; TOPORS; HIPK3; WDHD1; NFKB2; NFE2L3; TCF20; NFKBIB; MDM4; TWIST1; KMT2D; PRKDC; ZNF493; NOCT; IKZF3; HOXA1; TFDP2; BRIP1; CREM; NFAT5; ZXDC; ZBTB3; THRAP3; ZNF460; ZNF529; PPARD; SMARCD2; PAX8; MEF2C; CTR9; MECP2; NCOR1; GFI1; ZBTB39; GATA1; SPDEF; SOHLH2; MYBL2; ZSCAN18; E2F3; STAT5B; SNAI1; HCFC1; TSG101; ZNF443; GABPB1; RELB; THRA; ZSCAN16; SOX17; ZNF516; MDM2; TRRAP; ARRB1; MYB; EHMT1; KLF3; ZNF208; CDX1; CARF; ECD; FOXI1; PSMD9; ZNF195; ZNF93; CCNA2; TBPL1; FOXO1; MTF1; ETS1; PBX2; TGIF1; NR2F6; HDAC9; ZNF3; ID4; NANOG; HIVEP2; NLK; PFDN5; CHD7; TXNIP; AFF4; MITF; SALL2; IRF2; SMARCA2; ZSCAN9; TFDP1; TAL1; ZNF764; TBP; RBPJ; PEG3; CDK7; ZNF239; HMGB3; ZNF552; DNAJC2; YY1; SKIL; MED20; ZNF143; STAT3; NUP62; OLIG2; SOX21; SMARCA1; TADA2A; CHD4; ORC2; TSC22D1; MECOM; L3MBTL1; POU4F1; VPS72; BHLHE40; MTF2; TAF1; ZNF43; KMT2B; TFAM; ASH1L; SAP130; MEIS1; CRYM; DNMT3B; NR4A2; ZNF492; TBL1XR1; FOXA2; NR1H4; MNT; ZNF669; NPAT; OVOL2; MYC; HSF2; ZNF124; ZNF574; PARP1; CIITA; ZNF467; MKL2; LIMD1; MYRF; BARX1; HDAC2; DLX5; ELF4; PLAG1; NR4A3; CBFA2T3; HTATIP2; NFE2; BANP; HIC2; ZNF257; SSBP3; TAF9B; POU5F1B; MDFI; URI1; SUMO1; TRPS1; HOXA2; ETS2; YEATS4; BCOR; RUVBL1; HMG20A; SPIB; DEK; MED12; ZNF350; TERF1; ATF1; ST18; TAF1A; SMAD2; CIR1; FUBP1; FOXA1; ZNF117; SKI; ZNF253; ZNF562; HDGF; TAF5; STAT4; ZNF267; TRIM24; SUPT5H; ZNF721; CCNH; MED14; CUX2; RNF141; UBE2L3; RHOA; CD3D; MAFG; NCOA1; ZNF536; MYCBP; PHF8; GTF2I; NKRF; WT1; CDK2; VGLL1; HOXB6; SOX13; NFIL3; HOXB5; ZNF532; EZH2; SETDB1; ZIC1; E2F8; ZNF652; SMARCA4; GTF2A2; BCL11A; GRHL2; NR4A1; MLXIP; HLTF; HLX; NCOR2; ID3; REL; ATF3; SIX3; JARID2; TMF1; MAFF; TFAP2A; TOB1; SP2; EHMT2; KLF1; NFATC3; NFE2L2; ZNF33B; AATF; EMX2; MYCN; ZBTB18; PCGF2; DPF2; BAZ1A; RBPMS; ZNF85; HOXB2; SMAD3; ASH2L; ID1; BNC2; DNMT1; KAT7; HMGB1; RERE; TAF10; CUX1; HMGA1; ARID4A; HMGN3; TSC22D3; GMNN; NKX2-1; ZNF423; CBX6; TGFB1; TBX2; ING3; ARNT2; E2F2; TLE1; XBP1; ERBB4; SUV39H1; OSR2
Down-regulation	367	PUF60; CEBPB; LOXL2; ATF5; ERBB2; PTRF; STAT1; NFKBIA; APEX1; ZZZ3; FOSL1; MBD3; CERS4; PSIP1; ATF4; SP110; FOXF2; ZNF7; UBP1; HSF1; CTBP1; CREB1; ZNF16; TCEA1; ERCC3; CENPB; SHOX2; TGFB1I1; ZNF263; THAP11; HOXA10; ZBTB17; GLI2; FOXN3; MED27; NELFB; MED16; SP100; PCGF1; GTF3A; ZNF593; RXRB; DR1; CBX4; PTTG1; WWTR1; TLE2; AES; ZNF76; HDAC3; ZNF219; ZNF446; KAT2A; ZSCAN5A; ING4; HOXB13; YBX3; MNDA; HMGXB3; RBM39; CBX3; TRIB3; TOX4; SP140L; ZEB1; YAP1; IKBKAP; ZNF250; FOXJ2; CRTC1; ZNF688; MED17; E4F1; CNOT6; ATF7IP; TRIM16; CNOT3; TADA3; REXO4; PSPC1; ZNF133; ZNF34; HOXA4; ZBTB7A; TULP3; ARNTL2; ZNF140; FLNA; MSL3; ZNF668; ALX3; SIRT7; TCF15; TRIM27; MAFB; MXI1; VSX1; BRD2; ZBTB48; CSDC2; SIX5; ZSCAN31; TSHZ2; USP21; POLR3F; ZNF12; SMAD9; CIZ1; GCFC2; LZTR1; TFEC; IRF7; MED24; HIRA; HMGB2; PRMT2; GTF2F1; ZFX; NPM1; RCOR1; CEBPG; ZNF419; SIRT2; SUB1; ERF; MEF2A; ESRRB; LHX1; TRIM32; CNOT1; SMAD1; TEAD4; NR2F2; DAXX; HMG20B; MAZ; NFIB; CARHSP1; ITGB3BP; VGLL4; BLZF1; ZNF623; NRIP1; BRPF1; ZNF35; ZNF45; CHD9; PAX6; MED15; CREB3L1; HSF4; RFC1; MTA1; TBX3; FOXC1; SIX1; ZSCAN12; ZNF112; MAF; ZNF576; ELF2; SLC2A4RG; PHF1; SMAD4; BTF3; ZMIZ1; RFX5; ID2; HOXD13; CREG1; SCAND1; RXRA; HIPK1; ATN1; ARID4B; RAD21; GATA6; DLX2; PAWR; CCNC; JUNB; BASP1; SF1; ZNF174; ZNF358; ATOH1; ZNF32; CNBP; ETV4; EN1; ZNF444; ARL2BP; TRIP4; ZNF189; ZNF512B; MED21; HCFC2; IRF3; CEBPE; CNOT2; CITED2; ZNF426; TCF3; CIC; UBTF; MTDH; CEBPD; E2F6; ZNF24; SOX9; ZNF148; LBX1; PRRX2; KLF13; ZNF232; RING1; TBX10; SALL1; MSC; KLF5; CBX7; CTCF; SOX11; HOXA7; CRK; BAZ2B; ZFHX3; TOX; ABL1; ZNF580; ZNF146; TRIM28; ING1; TFCP2; TEAD3; CREBL2; ZHX2; ZNF227; GMEB1; CHD8; UIMC1; TRAK1; STAT6; ELK1; SMARCB1; ARID5B; TCF25; PCGF3; CAMTA1; SUPT3H; RFXANK; BTG1; ZNF500; ZSCAN32; DEAF1; RYBP; MSX1; PSMC3IP; NFE2L1; PBXIP1; ZNF202; FOXM1; PDLIM1; SSBP2; SRCAP; ZNF410; NR1H2; TAF11; LMCD1; PRDM12; BRD3; RXRG; KLF7; ZNF768; KAT6B; PRDM4; NR0B1; PHF20; TAF6; RLF; NKX3-1; ZNF83; SUPT4H1; PBX1; SPEN; RNF10; USP16; TOX3; HOXD9; ZNF589; CDK9; MED25; SRF; ZNF473; CCDC59; ZNF430; RBFOX2; BIRC2; GATA2; MNAT1; FOSL2; NPAS2; ZNF266; DDX5; DBP; ZNF302; NOC2L; ZFHX4; MXD4; ZKSCAN1; ZNF557; ZBTB11; THAP7; NCOA4; TFEB; ZEB2; NR2F1; HABP4; JUP; HDAC7; MED23; TDP2; BBX; HHEX; ZBTB38; ARID5A; SOX15; SFPQ; RBBP7; CAPN15; KAT2B; DMTF1; ETV5; PBRM1; SFMBT1; IRF9; YWHAB; TRIM29; JUND; IRF8; IFI16; DACH1; TAF7; SATB2; HOXC6; HOXA11; HBP1; ZMYM2; DNAJC1; NAB1; KLF6; RUNX1; SATB1; FOXF1; ELK3; NFYC; PREB; CBFB; MEIS2; HOXA5; KLF2; UBE2I; BATF3; HES1; MYCL; CEBPZ; NR1D2