Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID78427 Vorinostat GSE92742 NPC Human 24h 10uM EID0462
Types Number Response transcription factors
Up-regulation 153 FOS; DRAP1; EGR1; PPARD; FOXO4; CITED2; JUNB; CDK7; CREG1; GTF2A2; SND1; FOSB; MEF2D; JUN; CCNC; MLXIP; ZBTB7A; MYCBP; POU2AF1; RCOR1; MEF2C; TCF15; SETD3; ESRRA; PIAS1; PURA; ZNF224; SIX1; HDAC4; ADNP2; ZNF205; SNAI1; IRF3; SAP130; CEBPA; APBB1; AATF; LMCD1; THAP4; CBX6; NAB2; NR4A1; ETS1; ZNF646; ZNF593; MNAT1; POU2F2; TCF7; ECD; ATF3; HDAC7; MED1; KLF2; HHEX; RUVBL1; NR0B1; SAFB2; DDIT3; ZNF175; SIRT2; MAX; SERTAD2; PHF8; KLF6; ELF1; SSBP2; KDM4C; MYT1; PPP1R13L; PAX5; NFIC; NFAT5; TFAM; HOXA1; NR4A2; BRD4; SPIB; TOB1; NOC2L; SUB1; YWHAB; CREB3L1; CALCOCO1; ZNF671; CSDE1; CBX7; OVOL2; NR3C2; JUND; CEBPE; ARNTL; NFE2; INSR; ZBTB20; TBPL1; BRF2; BAZ2A; RXRB; HIVEP2; CEBPB; TAF4B; RUNX3; BCL3; TGFB1; PHF1; HMGA1; OSR2; TSC22D4; NEDD8; UBE2B; TFAP2A; MKL1; TAF12; PBXIP1; SMAD1; CALR; CTR9; HTATIP2; IRF1; ZBTB43; KLF5; BBX; TCF7L2; CRYM; PEG3; TERF2; NFKBIB; FOXJ3; RBBP8; ZNF331; ZFP36L1; SATB2; ZNF217; KLF10; VDR; ELF5; SOX9; HOXD1; JUP; EDF1; MXI1; NR4A3; TWIST1; ZBED2; AFF1; FOXD1; EGR2; EGR3; NKX3-1; ZMYM2; RELB; IKBKAP; HMG20B
Down-regulation 244 HMGA2; PCBD1; TP53; SMARCA4; ADNP; NUP62; PATZ1; ZMYND11; PHF2; GTF2I; NCOA2; HMGN3; FOXM1; PMF1; E2F5; TFDP1; ZEB1; BCL11A; HEY1; FHL2; BRIP1; NRIP1; C1QBP; ZIC1; ID4; VGLL4; GABPB1; CBFB; PLAGL1; RSF1; PRMT2; CNBP; PARP1; DMTF1; CTBP1; TGFB1I1; RBBP4; KLF3; RBM39; HMGB2; MED24; ZSCAN12; TSC22D3; LEF1; REPIN1; TCERG1; MYBL2; HMGB3; ZNF783; DDX5; BCOR; ZNF629; KAT2B; TRAK1; ZKSCAN7; PEX2; TBL1XR1; PBX3; USP21; EMX2; NPM1; ERBB2; IRX4; ZNF74; YBX1; HDGF; PITX2; HIPK2; USP22; BPTF; ZNF512B; ZNF33B; TGIF2; YAF2; PUF60; ZNF282; ZNF43; ZFP36L2; ZNF22; SUPT7L; NFKBIA; XBP1; GON4L; CTCF; BCLAF1; ZBTB6; TCF12; FUBP1; TAF9B; SOX17; TFEC; EZH2; ZNF532; MECOM; SALL1; ARID5B; CREBZF; SMARCA5; HOXB9; CHD7; FOXG1; ZNF189; ATF1; TCF7L1; TRIP6; LIMD1; DEAF1; ZNF140; MEIS1; BRD7; YEATS4; LIN28A; MGA; SMARCE1; HOXB2; ZNF253; ZFX; ZNF93; DDX17; TLE1; ZNF711; HDAC2; AGO2; CENPF; TRIM22; SCMH1; ZBED4; ZNF614; FOXF1; PHIP; SSRP1; ZNF7; PBRM1; ZNF226; UBE3A; PLAGL2; ZNF84; EYA2; TCEA1; NCOR1; ASXL1; ZBTB18; TCF3; SOX11; MED16; ZBTB1; TRPS1; HES1; ZZZ3; GLI2; ZNF623; LITAF; CARHSP1; ZNF107; ZNF529; SP3; EED; NR2C1; RREB1; STAT5B; STAT6; HNRNPD; YAP1; PSIP1; ATN1; AEBP1; ZNF468; ZNF134; ZFP64; CEBPG; ZFPM2; PQBP1; RRN3; ZNF24; CREBL2; ZNF195; ZNF516; RAN; BRD8; PGR; LPIN2; ZBED1; ZNF764; RFX7; ZNF146; SPEN; SLC2A4RG; RBM14; NFYA; NANOG; GTF2IRD1; GMNN; KAT7; ZBTB38; MYB; APEX1; EYA1; DEK; SCAND1; ZSCAN31; E2F3; CUX2; ZSCAN16; GABPA; NFIB; ZHX2; TBX2; ABL1; NFYB; CAPN15; TRRAP; HSBP1; RCOR3; MTA1; HSF1; SREBF1; ZNF131; ISL1; ETV1; SMAD3; NR1H3; HIC2; MYCN; ENY2; MEOX2; IFI16; HIPK3; MITF; TBL1X; DLX5; CTNNB1; PHF20; UBE2I; ASCL1; SOHLH2; ZBTB16; DACH1; E2F2; BMI1; TSC22D1; NFATC4; GATA6; TOX3; SUV39H1