Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77275 Methylene-blue GSE92742 NKDBA Human 24h 0.3704uM EID0449
Types Number Response transcription factors
Up-regulation 211 PPARG; BRCA1; NFATC3; ZHX2; ZNF85; ZNF91; MLLT10; KAT6A; BNC2; ZBED1; HMBOX1; TOX4; HOXB5; MYBL1; ZNF43; PRDM2; GATA2; ZNF44; HLX; HOXB1; NR1H2; TDRD3; HHEX; ZNF665; AFF2; ZNF239; RREB1; TRIM29; NAB2; HLF; NR0B2; NFIC; ZNF354A; E2F5; HOXB2; CALCOCO1; CNBP; GCFC2; NFATC4; NEUROD6; ZNF117; TCF7L2; CDK2; ZNF160; WDR77; CREM; SALL2; CDIP1; PRDM14; ZNF75D; ZNF180; GLI3; CLOCK; ZNF611; KLF3; CREB3L2; ZNF654; ZSCAN18; ZNF701; URI1; ZNF573; RFXANK; MECOM; CNOT3; DBP; VPS72; ELF4; ZNF331; HOXB6; ZNF83; PEG3; NFE2L2; ZNF586; MAML3; KLF5; SOX2; ELF2; SOX3; LITAF; RARG; THAP4; IRF1; ZNF273; PRDM1; ZNF587; EP300; MAFG; TAF5; ZIC1; SPIB; NRL; KAT8; ZNF131; TFAP2A; TGIF2; CTCF; MXD3; PAX6; PBX3; MBD1; RNF10; ZSCAN9; GTF2I; FOXF2; BACH1; CHD8; SPDEF; TAF12; RAD21; ZIC3; TUB; ZNF500; MED14; CUX1; ASXL1; ZNF444; NFE2; E2F4; HIPK1; CBX7; ZBTB16; CREB5; CEBPE; ZNF32; ERBB4; MAML1; BCL11A; ID1; TRPS1; TAF9B; ZNF721; ZNF516; FOXC1; DAXX; IRF3; KAT2A; CCNE1; HIC2; IRF9; ZFHX4; E2F8; CDYL; ZNF589; MZF1; TAF4B; ZMIZ1; PHIP; MED12; TRIM33; PCGF3; LHX2; LHX3; SOX17; KLF13; FOXK2; ZNF217; YAP1; ESR1; ETS1; MEIS1; ECD; CBX4; ZBED2; POU5F1B; IRF6; ZNF3; REL; NAB1; LYL1; THAP10; RBL2; IL16; PAXBP1; FOXO1; MECP2; SMARCD3; ZNF224; CDX1; PIAS1; FOSL2; LOXL2; TGFB1; BRIP1; ZNF93; CREBL2; ZNF232; E2F3; TFDP1; KDM5A; SIAH2; DLX2; SHOX2; SMARCA1; MEIS2; LIN28A; RUVBL1; TWIST1; TP63; ZBTB20; RBBP8; ZNF512B; MITF; FOXF1; SOX9; ID3; OSR2; TBL1X; NFAT5; SNAI2; EHF; ID2
Down-regulation 208 FHL2; C1QBP; MED24; PTRF; MED7; ERBB2; UBE2I; NR2F2; MED23; SMAD2; KDM2A; SSRP1; UBE3A; AATF; ATF4; SAFB2; JUN; SF1; HMGN3; NCOA6; POLR2A; YBX1; PTTG1; NELFB; SUV39H1; BMI1; SNW1; ENO1; YEATS2; MED1; TAF10; TBL1XR1; MED27; SMARCA2; MTA1; SND1; TSC22D1; MTA2; RBM14; SMARCE1; ETV5; STAT5A; NLK; SP140L; REXO4; RELA; MAGED1; EDF1; KAT6B; ZMIZ2; SP110; ZNF22; ING3; CEBPA; CRY1; CDK9; TTF1; BRD8; PHF8; FOXO3; ZBED4; SMARCD2; ZSCAN16; NUP62; HSBP1; DR1; DMRT1; PATZ1; C1D; SMARCA5; ATF1; BLZF1; PMF1; BATF3; WWTR1; TRRAP; TBP; BIRC2; NCOA4; TADA3; DRAP1; HSF2; TULP4; PRMT2; ATF5; PHF2; HCFC2; SAP18; USP22; ZNF593; HNRNPD; RNF138; ELK1; TFEC; VGLL4; BCLAF1; NCOR2; EZH2; MYCBP; NFKBIA; SREBF1; TRIM16; MTF2; CIZ1; RHOA; DDX54; ETV6; DNAJC1; FOXO4; KAT7; LMCD1; ZNF281; ABL1; KMT5A; CTR9; FOXN2; TFAM; ZBTB24; KLF2; KLF4; HOXB7; DPF2; FLNA; FOXJ3; BAZ1B; PITX2; TRIM28; ZNF189; SMAD3; ELF5; XRCC6; ZEB2; JUNB; TOX; RUVBL2; ZMYM2; TCF20; IRF8; BRD3; ZNF562; AEBP1; JARID2; ZNF468; ACTL6A; EYA1; CDK8; NRBF2; CREB3L1; RAN; ATF2; EMX2; ARNTL2; MEOX2; FOSL1; SPEN; MAFB; EYA2; HLTF; AIP; TCF4; CCDC59; NR2F1; NPM1; SMARCA4; HTATIP2; PAX8; TLE4; NFIB; FOSB; PIAS3; PRPF6; BHLHE41; HOXC6; SUB1; CREG1; BTG1; ELF1; TP53; TRIM32; RBPMS; TCERG1; SP3; TCF12; YWHAB; TRIP6; SAP30; OLIG2; CBFB; ZNF302; ID4; WWC1; PBX1; ST18; MSX1; HMGA2; ELF3; DNMT1; HMG20B; SOX4; VDR; PITX1; HOXC10; PCGF2; ELK3; CRK; CITED2; RFX5; ARID4B