Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77273 Methylene-blue GSE92742 NKDBA Human 24h 3.3333uM EID0449
Types Number Response transcription factors
Up-regulation 216 ZNF85; ZBED1; KAT6A; ZNF117; ZNF623; RING1; ZNF43; ERBB4; VPS72; ZNF415; SOX2; SOHLH2; OVOL2; ELF4; PEX14; CEBPD; ZNF91; SETDB1; ZNF606; NFATC3; GTF2I; NR2F6; NKX2-1; CDIP1; ZNF180; SALL2; MYBL1; SUMO1; ZNF350; JUP; ZKSCAN4; GATA2; PBXIP1; HMBOX1; PRDM14; TEAD4; BARX1; ZNF177; PCGF1; ARID5A; ZNF345; PRDM1; KLF7; KLF3; PAX6; WDR77; HLX; ZNF467; ADNP2; IRF9; HOXB5; ZNF394; GFI1B; TFAP2A; FOXF2; CERS4; NR1H2; THAP4; ELF2; HEY1; OSR2; ZNF14; ZNF83; HIC2; ZNF107; HOXC11; TGIF2; ZNF510; NR0B2; RUNX1; ZFP30; GMEB2; ZNF253; PRDM2; ZNF44; CCNE1; FUBP1; ZNF273; CLOCK; ZNF573; TAF1C; TULP3; ARID1A; MBD1; SHOX2; ZNF331; ZNF7; ZSCAN31; ZNF354A; ZNF665; HES1; CDK2; POU3F2; RFXANK; TCF7L2; MYBL2; ZNF133; TAF4; ZNF556; ZNF232; CITED1; SUPT7L; ZNF562; PLAG1; NFE2; SMARCC2; SPDEF; ZSCAN18; ZSCAN9; KLF9; ZMIZ1; MDM4; ZNF195; ZNF239; ZNF668; BNC1; E2F3; IRF6; ESR1; ZNF444; TRIB3; ZNF512B; CBFA2T2; ETS1; DLX2; VGLL1; ZNF74; TGIF1; SOX17; HHEX; ZNF304; CALR; POLR3C; AES; ETS2; BRWD1; ZNF12; ZFP69B; PBX3; FOXN2; EPAS1; BCL3; AR; AEBP1; SLC2A4RG; RARG; KAT8; RBBP8; MED14; NFYA; RFX7; TXNIP; PMS1; NFATC4; PHIP; ZNF200; ZNF589; TCF7L1; TP73; LHX3; HOXB6; ZBED2; TOX; BANP; DNMT1; HIPK3; JUNB; ATF3; ZNF32; MDM2; BAZ2A; RAD21; FOXG1; DAXX; ZNF24; FOXE1; MECOM; NAB1; RUVBL1; KLF13; DACH1; SETD3; RNF138; MED17; PAXBP1; SKI; HMGB2; CREB1; NR1H3; MED13; ISL1; DEK; TRIM29; TGFB1; CUX2; ZNF124; AHR; LITAF; TCEA2; SAP30; TRPS1; CERS6; DMTF1; FOXC1; KLF11; NR4A2; HOXD1; TOPORS; FOXF1; SMAD1; ZIC1; TP63; HOXC10; PEG3; SSBP2; MEIS2
Down-regulation 196 SND1; CCNA2; MED23; ZFP36L1; DNAJC1; AATF; FOXJ3; FLNA; NR2F2; PTRF; TOX3; HSBP1; YBX1; POU2F1; BMI1; TBL1XR1; RBM14; ZEB2; C1QBP; NCOA4; CREB3L1; USF2; FHL2; HOXA10; SATB2; TBPL1; TSC22D2; SMARCA2; KAT7; TAF10; ZNF148; PEX2; ENO1; CIZ1; BCL10; ZMIZ2; UBE2B; MED24; KAT6B; ELF5; BTAF1; NCOR2; CTR9; SMARCC1; ZNF226; PTTG1; HLTF; EDF1; MAGED1; ELK1; ATF7IP; NUP62; SMARCA4; MYC; MED4; RBL1; SMAD2; WWTR1; HOXB7; CHD1; TRIM28; SF1; MYCBP; SMARCA5; USP22; EP400; TOB1; NLK; TRAK1; CENPF; KDM2A; ZBTB38; ALX1; RBBP7; ZBTB1; YWHAB; RBBP5; SUZ12; ITGB3BP; TEAD3; RHOA; FOXO3; RNF14; FOSL1; PHF8; ZNF672; TGFB1I1; RFX5; SMARCD2; NPAS2; ATF1; NR1I2; TBP; BAZ1B; NRBF2; MLXIP; RERE; TRIM32; EZH2; NFKBIA; DRAP1; CITED2; MAZ; BASP1; INSR; MAFB; MAFG; PSPC1; MAF; HLF; KLF4; JARID2; ASH2L; CEBPZ; RBBP4; RUVBL2; TP53; SNAI2; TRRAP; NANOG; BTG1; TULP4; IRF5; MMS19; NCOA6; IRF8; UBP1; SP2; DDX5; PHF2; FOSB; CARHSP1; BRD4; PLAGL1; CDK8; ZNF212; EMX2; BCLAF1; TCERG1; BHLHE40; SREBF1; LMCD1; TSC22D1; POLR2A; SIAH2; PMF1; ELF1; COPS2; MED1; ARNTL2; BRD8; TCF21; SMAD4; SPEN; CREG1; RBPMS; IFI16; BAZ1A; HOXC6; TRIM16; PRRX1; KMT2B; AFF1; SIRT7; TLE4; PIAS3; BRD3; ETV5; TBL1X; ID2; KLF2; NFIB; IRF4; ZMYND8; RAN; KDM5D; PARP1; ARID4B; ECD; SOX4; WWC1; FOXN3; MSX1; HTATIP2; PAX8; TRIP6; CRK; KDM5A; POU2AF1; ZNF274; HMGA2; ELF3; HMG20B; MBD2; SCAND1; EHF