Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77272 Methylene-blue GSE92742 NKDBA Human 24h 10uM EID0449
Types Number Response transcription factors
Up-regulation 445 NR3C1; MKL2; KDM5B; ETV1; CEBPA; GATA2; EGR1; ZBTB25; IRX5; ETS2; ZNF14; MYB; SUV39H1; KMT2A; TGIF2; SMARCD2; DLX4; TFDP2; HLTF; GLI2; ZNF556; CIITA; ZNF248; ASCL1; GABPB1; NCOA1; OVOL2; DBP; PATZ1; HIVEP2; TCFL5; NKX2-1; NFE2; RUNX1; ZNF629; BCL11A; RB1; LZTS1; EYA2; KAT6B; NCOA3; MDM2; CCNE1; ZFP37; DLX5; KAT8; CHD3; BRDT; MYBL2; TFAP2B; PPARG; HOXC13; SHOX; HAND1; L3MBTL1; FOSB; SOX30; NEUROD1; EED; NEUROG2; PSMD9; POU3F4; PPARD; E2F8; TAF7L; TRIM25; RARA; POU4F1; ZNF79; PKNOX1; PAX5; ZNF654; PURA; TFDP1; POU3F1; RREB1; HDAC4; PAX3; ZBTB6; KLF7; URI1; XBP1; MEOX1; PLAG1; ZNF711; IKZF2; ZKSCAN4; HOXC8; SP140; TLX3; CHD8; BCL11B; TEF; MEF2A; PRRX1; IKZF3; ZNF778; NFIL3; YY1; ZNF552; RFXAP; TULP4; OSR2; FOXE1; MLLT1; SMAD9; SCRT1; HEY1; ZNF415; CD3D; HDAC6; NR2C2; IL16; SOX2; BRCA1; ZNF253; PRMT2; ZNF672; TAF1A; TCF21; POU2F3; SERTAD2; CREB3L2; PRDM5; ZNF460; GRHL2; ZNF440; PIAS3; ZBTB48; RARG; POU2F1; GFI1; NFIC; ZNF536; PLAGL2; EPAS1; ZNF506; SOHLH2; AFF4; NFATC1; RELB; STAT5A; RFX3; SETD2; YAF2; SNAI1; GCM1; ZNF692; ZNF273; TXNIP; ZNF493; FUBP1; HMG20A; MYBBP1A; ZNF200; TOX4; RBBP7; NPAS1; EMX2; SUPT6H; HSBP1; NCOA6; STAT3; CREM; CBX2; NKX3-1; EP400; ZNF165; DDX17; ZIC1; CEBPZ; LHX2; ZNF764; EHMT2; PBXIP1; RFX7; RELA; AFF3; GABPA; LYL1; ZHX3; PAX7; VHL; SIX3; ZBED1; ZBTB40; PHF20; NR4A2; TULP1; BPTF; PHOX2B; ASXL1; CREB5; NFKBIB; E2F5; PPRC1; MSX1; ZNF443; ZBTB32; IFNB1; BRWD1; PRDM2; MSX2; ZKSCAN8; GTF2I; PGR; ZNF695; SOX11; CTR9; KLF3; NKX3-2; BACH1; ZSCAN18; CNOT3; ZNF652; BLM; NFE2L2; NFYC; HOXD12; ARID3A; EYA1; WNT4; TBP; FOXO4; TAF4; BATF; BRIP1; NUP62; FOXD3; NFKB1; RUNX3; CBL; ZNF492; HIC1; KLF4; FHL5; ZFHX4; KDM2A; CASZ1; NR3C2; ZNF80; ID1; TERF2; CBFA2T3; SOX1; PITX2; POU6F2; TSC22D1; ZNF131; USF2; GRIP1; ZNF835; ZNF467; SMARCA5; MED7; PEG3; ERG; SOX21; HSF2; TONSL; SETDB1; ESRRG; SSX1; CIR1; ZNF107; HHEX; ELK1; ZNF391; CBFA2T2; TAF1; VPS72; ZNF473; SREBF1; KAT2A; FOXF1; MBD4; POLR2A; PHF8; ZFY; EGR3; GATA4; DLX6; PROX1; LEF1; TAF4B; NPAT; TULP2; PRDM9; ZNF282; AES; WHSC1L1; CARM1; PHOX2A; ID2; ID4; TRIM16; CDK8; SUV39H2; TBL1X; RNF141; MED14; KLF9; PAXBP1; EBF2; SMARCA4; ZNF529; HR; ZNF480; NFATC4; STAT5B; RBL1; IRF4; DPF2; TP73; NCOA4; ZXDC; MED1; SRY; CALR; CXXC1; MYNN; NR0B1; SOX4; DLX2; CCNA2; SAP30; HIC2; MYCN; MEOX2; ZBTB3; ING2; IRF2; E2F2; SPDEF; TRIM33; PAWR; ZBTB43; BMI1; KMT5A; CCDC59; BANP; HMGN3; PPARA; NRL; GATA3; MAFG; TRAK1; BHLHE40; ZNF701; NFKB2; HINFP; ZBTB18; SCMH1; CRYM; DNMT3B; EZH1; HOXC10; ZNF721; PHIP; SP140L; PPARGC1A; BRD7; PMS1; KDM5D; FOXN2; AEBP1; SMARCA2; ZNF136; ZNF623; BNC1; CEBPE; ZMYND8; CDYL; SMARCA1; MEN1; ESR1; ARID3B; ZNF23; SMARCD3; CARF; BHLHE41; OVOL1; FOXG1; TFEC; ADNP; SKI; WT1; BTG1; TCF4; ZNF587; CDK2; BCL10; JARID2; RUVBL2; PFDN5; HOXC6; ZEB1; DNMT1; CUX1; MAX; ZIC3; REL; TBX1; ORC2; HMBOX1; TBPL1; ZFPM2; MECOM; SSBP3; NEDD8; NR2E1; MXD1; POU2AF1; MYT1L; OLIG2; ZNF24; KAT5; HOXB2; MDM4; SETD3; NFAT5; TTF2; YBX2; TRIM22; TRIM28; FOXC1; TRRAP; SCAND1; PLAGL1; AIP; CITED2; CITED1; CBX6; UBP1; BAZ1A; ATF3; MAGED1; TBX3; MEIS1; ISL1; ERBB4; PCGF2; ID3; ECD; TP53
Down-regulation 408 TRIB3; PTTG1; ATF4; TULP3; ZMIZ1; BIRC2; TCEA1; MYBL1; CBX3; COPS5; NR2F2; SUPT5H; CTBP2; PTRF; PSIP1; PCBD1; ZNF32; ZFP36L1; UBE3A; HBP1; ARID1A; HOXA10; CTBP1; PHF1; ZBTB7A; ZBED4; ARID5B; TEAD4; MAZ; KAT2B; CDC5L; MED15; ZNF593; ARL2BP; TCEB2; SRF; SIRT2; GTF3A; FHL2; TGFB1I1; MTF2; RING1; NCOR1; CEBPB; TERF1; WDR77; ING4; INSR; RFC1; YEATS2; TAF6; NR1H2; DR1; TADA3; SAP18; MED21; YBX3; GTF2A2; ADNP2; HIRA; RBFOX2; RNF6; LOXL2; LZTR1; GATA6; ZNF586; SLC2A4RG; NFATC3; NFIB; RLF; ZNF239; UBE2B; CREBL2; CBFB; RORC; HOXA11; RNF138; IRF6; NCOA2; HSF1; GTF2IRD1; MLXIPL; RAD21; SF1; SMARCC2; HMGXB3; SUB1; ENY2; AHR; TGIF1; BRD8; TAF12; ERBB2; ZNF215; BCL3; ZFP36L2; HDAC2; THAP10; ATN1; SATB2; MED16; ALX1; ESRRA; MEF2D; SOX10; CIC; MTA1; MYRF; ZNF112; ZBTB38; MBD3; MED13; PUF60; PCGF3; ZBTB20; ZNF12; LPIN2; TBL1XR1; ZNF74; HOXA3; CALCOCO1; TAF5L; PEX2; PRDM4; CEBPD; TRIP4; NPM1; ZNF140; ZNF250; AR; RBPJL; ZFHX2; ZNF423; ZNF8; USP21; FLI1; HMX1; BRD2; ZBTB1; STAT6; CDIP1; MXD4; ZNF787; KLF6; POU5F1B; APEX1; MED25; SMARCD1; SUMO1; LMCD1; ZNF34; SMAD3; HMGB1; CBX7; HMGB2; TRAF6; FLNA; VSX1; TFCP2; FOXJ3; ELF2; THAP4; CNOT1; DDX5; JUN; HEYL; KLF11; CRY1; TOX3; NR2C1; COPS2; TOX; SMARCE1; FOXM1; ETV7; CHD1; PREB; ZNF532; SP2; MEIS2; BNC2; MED31; MYT1; ZNF446; CNOT2; NANOG; FOS; HOXB3; HOXB7; ENO1; ZNF574; APBB1; MAFF; NFE2L3; PRDM14; NR4A3; HDAC3; PSPC1; CREG1; MED17; UBTF; YBX1; ZMYM2; SFPQ; TAF10; ZSCAN32; UBE2I; PMF1; ERF; C1QBP; TSHZ2; ZNF223; TOB1; SUZ12; ZNF232; ZNF45; ZNF562; ETV5; BTF3; PRDM10; ZNF576; ZNF771; ZBTB11; HOXD13; SAFB2; TSG101; CENPB; HOXB9; WWTR1; NONO; RBBP8; IRF5; SOX12; TGS1; DDX54; ZNF155; NKRF; TAF9B; FOXJ2; NACA; SNW1; DMTF1; GBX1; ZNF358; ZNF84; CHD9; ZNF408; TRIP6; HCFC2; TAF7; ZNF394; HOXD1; CDX2; CARHSP1; DDIT3; NRBF2; JUND; HTATIP2; HOXA4; EVX1; MED27; ZNF432; ZNF354A; RYBP; ZNF606; NR5A2; THAP11; BCL6; ATOH1; NOC2L; ATF5; ZNF189; ZNF337; ARNTL2; ZNF264; CUX2; ZNF219; MBD2; ZNF324; ZNF410; ZSCAN2; STAT4; MED4; HIVEP3; SMAD7; RNF4; ZNF22; ZNF544; FOXO3; TLX1; HOXA5; PHF2; TLE4; TAF9; HABP4; ZNF551; ACTL6B; CDX1; RCOR1; TTF1; HOXD11; MDFI; GON4L; TCF3; KDM5C; ZNF43; GATAD2A; LHX3; MITF; ZNF263; STAT1; CERS6; ZNF430; RERE; PBX1; ZNF500; SMARCB1; MXI1; NKX2-2; TSC22D3; ZKSCAN1; TCF7L1; KLF5; SMAD4; XRCC6; CCNC; BCOR; NR1H4; CSDE1; BASP1; WWC1; TEAD3; NR2F1; TOPORS; NR4A1; BLZF1; ZNF426; FOSL1; PBX3; SMARCC1; TCF7L2; E2F6; CNOT6; ZZZ3; INSM1; IFI16; MXD3; ZNF268; DAXX; ITGB3BP; NRIP1; HMG20B; RAN; ARID5A; NAB2; SP110; SMAD1; TDP2; HOXB13; ZNF384; ACTL6A; HDAC9; ELF4; HIPK2; FOXF2; RBBP4; SP3; SIRT7; TLE1; YWHAB; ELK3; FOXN3; TBX2; TCF25; ZNF646; AGO2; CREB3; ELF5; MED24; IRF7; ZNF124; HIPK1; CBX4; ELF1; MAFB; ARID4B; SPEN; RFX5; ZNF226; KDM5A; MYCL; BACH2; ZMIZ2; TWIST1; ST18; EN1; SSBP2; CAMTA1; IRF8; DACH1; BAZ2B; IRF9; SOX9; VGLL4; TRIM32; EHF; CRK; ZNF217