Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77248 Trichostatin-a GSE92742 NKDBA Human 24h 1.1111uM EID0449
Types Number Response transcription factors
Up-regulation 262 PPARG; RELB; NR3C1; NR1H2; ZNF394; ZHX2; HDAC5; TFDP2; MYRF; NEUROD6; PBXIP1; CALCOCO1; ZNF423; ZXDC; TCF7L2; ZNF589; TOX3; PHF1; CDIP1; ADNP2; MEOX2; BCL11B; ERBB4; KDM4C; HIC2; PAX6; MTF1; SALL1; TOX4; ZBED1; MEN1; CHD2; PEX14; DBP; ZNF85; RING1; ESRRA; ZNF354A; ARID5A; ZNF180; SUPT4H1; ZFHX4; ZNF711; PEG3; FOXF2; SALL2; TEAD3; SIX6; JUNB; CBX4; HESX1; CD3D; ZNF117; TBX21; NCOA1; ZBTB18; HIRA; ADRB2; TBX3; CIR1; POU3F2; RSF1; SUPT6H; MAFK; MNX1; SRF; TBX4; HDAC4; IKZF2; HR; ZNF219; CREM; ZNF331; HOXB13; EP300; SUB1; MED15; HOXD1; CNOT2; CCNE1; IRF6; TCF7; STAT2; PRDM2; CEBPA; PRDM14; ING1; MXD3; PCGF1; NR4A3; ZNF34; EN1; NFYA; NHLH2; CBX7; EBF2; HNF1A; SPIB; ZNF91; ZNF682; MED14; JUN; GLI3; INSR; ZNF444; ZNF671; CAMTA1; ETV7; ZNF571; HSF4; ALX3; USF2; PSMD9; POU4F1; ZNF43; ZKSCAN3; DLX2; MNDA; GFI1; KDM5C; MYOD1; ZNF350; MZF1; ZBTB48; GLI1; ARID4B; TLE4; ZNF556; FOSL2; URI1; BARX1; PIAS1; PITX2; ESRRG; NOC2L; NEDD8; ZNF536; NKX2-1; CIC; PPARA; NFATC1; CIITA; NR0B2; CEBPE; DLX5; IKBKAP; SHOX2; BCL11A; ZKSCAN7; SOX2; TCF7L1; RELA; SIRT2; PAXBP1; HOXD11; TAF5L; NFKB2; SOX11; E4F1; IRX4; THRA; SSBP3; KLF7; THAP4; NR3C2; EYA2; SETD3; ARID3B; PIAS4; ATF3; NFE2L2; E2F8; FOXI1; ZIC1; NR4A1; MEIS2; NAB2; NCOA3; RRN3; MYOG; MYCL; LHX3; TAF4B; PAX5; ZNF44; CREG1; CRYM; MAML1; SMARCA1; ZBTB17; SMARCD3; FOXJ1; TCEA2; PBX2; RLF; GON4L; ZNF205; TP63; ERF; NFE2L1; RUVBL1; RREB1; CNOT3; TRIM24; PNRC1; FOXG1; MDM4; HEY1; HIVEP2; SPEN; HMG20B; PROX1; AEBP1; NKX2-2; MAX; ZBTB39; RERE; STAT4; TGIF2; JAK2; PFDN5; RUNX3; PBX1; RCOR1; NR2F1; IRF7; JARID2; TXNIP; LITAF; KLF9; JUND; RARG; ZNF93; TAF10; TAL1; RNF10; DDIT3; SKI; FOXK2; PITX1; BCOR; ETS1; JUP; SIX1; POU2AF1; ZNF232; NR4A2; TOPORS; BHLHE41; MAF; KLF13; YBX3; OSR2; TFAP2C; SMAD7; INSM1; REL; SSBP2; HOXB7; TGFB1; SOX9; ID4
Down-regulation 308 ZMIZ1; SUV39H1; CBX3; CCNA2; ATF1; TSC22D3; NR2F6; CTBP2; BRCA1; NR2F2; PQBP1; HSBP1; SMARCE1; BNC2; REPIN1; HOXA10; BCL10; DR1; BIRC2; FOSL1; CTBP1; PEX2; SMARCD2; NPM1; USP22; PDLIM1; FOXJ3; PRDM10; TFAP2A; NUP62; TAF4; ZBTB38; SMAD2; MTA1; ZBTB1; HDAC6; NFYC; MED7; ADNP; PTRF; UBE2I; MITF; PTTG1; ARNT; ETS2; ACTL6A; EZH2; TAF1D; TBL1XR1; KLF6; ATF6; HIF1A; SMARCC2; BRF2; ZNF202; PBX3; DEK; BRD8; SND1; NCOA4; PRKDC; CENPF; CEBPZ; RNF14; ZNF148; ELK3; PSIP1; TFAM; CHD3; E2F5; RCOR3; EWSR1; PATZ1; MYBL1; SUPT3H; NELFB; ZBTB16; MED21; BCLAF1; GABPA; ZNF337; TRRAP; KMT2A; BMI1; PCBD1; CCNC; KDM4A; PRMT2; CNBP; PHF2; C1QBP; YBX1; THAP1; WHSC1; TFEC; CDYL; SATB2; GTF3A; KLF4; SMAD3; SUZ12; IFI16; ZNF146; PBRM1; SMARCA5; PSPC1; MTF2; SMARCC1; ZNF160; GABPB1; ZNF248; YAF2; NFIB; SFMBT1; HMG20A; TCERG1; FHL2; HOXB9; EED; PIR; CIZ1; TRIP4; COPS5; HOXA11; ZSCAN18; WWTR1; TCF12; ARNTL2; RBM14; ZBTB24; TBP; NFYB; POU2F1; RBBP7; AHR; HMGB2; STAT6; PRPF6; SRCAP; FOXM1; ERCC3; MXD4; TRIM32; ZBTB20; SFPQ; NCOR2; LMCD1; HMGA1; MAFB; TAF7; HMGB1; HDAC9; MYCBP; BAZ1B; BHLHE40; ELK1; HCFC1; DDX54; SREBF1; BLM; RBL1; ZMYM2; RB1; TGIF1; MYNN; MBD2; HNF1B; MMS19; ATF5; SIM2; WWP1; XBP1; ERG; HTATIP2; ZNF721; PMF1; RAN; HMGA2; TAF1A; ING3; SCMH1; SP2; MNAT1; KAT6B; NFKBIB; STAT3; DNAJC1; ZBED4; SP110; HNRNPD; ZFP64; PHOX2A; HMGN3; ZMYND11; PUF60; KDM5D; SKIL; VEZF1; EDF1; NCOR1; POLR3C; TCF21; MED4; DPF2; TAF9B; SP140L; PHF20; SMARCA4; SERTAD2; MED27; ETV6; CREB5; ZFP36L2; CRY1; NFIL3; PCGF3; BAZ1A; KAT2B; PGR; PPRC1; NFRKB; ITGB3BP; SP100; ZNF783; MECOM; ZMYND8; ZNF32; TTF2; ZNF532; PHOX2B; HDGF; NR1I2; HMGB3; ETV5; ILF2; SOX10; WWC1; MYT1; CBX6; FOXO3; NLK; ZNF22; ELF1; AFF1; E2F3; HLTF; ZZZ3; ZNF652; NPAS2; ZKSCAN1; ZNF3; RNF111; CBFB; EMX2; TCF25; EGR2; AGO2; MED12; SMAD6; E2F6; ZNF217; CDC5L; ZNF329; ZNF282; MEIS1; ELF3; PIAS3; GATA6; RFX5; ZNF264; ZNF124; RBPMS; ZNF165; UIMC1; TRIP6; YWHAB; ELF5; HOXC6; BTG1; ZEB2; AR; HOXC10; NFATC4; PURA; PAX8; NFKBIA; TSC22D1; DNAJC2; DNMT3B; LOXL2; RBFOX2; SMARCA2; ID3; TRIM27; BRD3; TP53; SNAI2; CITED2; TWIST1; NRIP1; EHF; VGLL4; PLAGL1; PCGF2; RBBP4; CRK; ID1; BASP1