Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77194 Trichostatin-a GSE92742 NKDBA Human 24h 0.3704uM EID0448
Types Number Response transcription factors
Up-regulation 57 GLI2; ECD; SOX2; NCOA3; BNC2; WT1; DNMT1; TCEA2; TCF21; ZNF337; MYCN; PAWR; ZNF93; JUN; FOXO1; SOX17; GATA6; MED14; ZNF85; MAF; ZNF512B; BACH2; EHMT2; CERS6; PPARD; MNDA; NR1H2; AEBP1; HDAC4; TBPL1; BTG1; ZSCAN31; PAX8; HIRA; PHF1; LEF1; SOX11; TGIF2; ZNF91; ID4; ERBB4; KDM5D; KLF4; HIC2; BHLHE41; NKX2-2; GMNN; KAT6B; ZNF652; CREG1; HOXB2; SNAI2; PEG3; TRIM22; TOX3; BASP1; CDK7
Down-regulation 67 ATF5; FOSL1; BRD8; PPARGC1A; NFIB; FOXG1; SUV39H1; PSMD9; NCOA6; SMAD1; SFPQ; ELF3; AHR; PITX1; SUB1; SAP30; NR1I2; FOXM1; RELB; SLC2A4RG; CCNA2; CENPF; HOXB6; HOXA7; LPIN2; SAP18; BCL3; CBX3; ZNF593; ZMIZ2; RNF4; ELF1; HMGB2; ELK3; ESR1; RBPMS; CNOT2; ZNF226; MYCBP; FOXF2; KLF5; HDAC1; SMAD3; SMARCA5; HMGA1; TCERG1; GTF3A; INSR; DDIT3; TOB1; STAT3; TP53; PCGF3; FOXF1; ZBTB18; NPAS2; ERBB2; VPS72; SOX9; PBX1; CRK; TBL1X; ZMYM2; MSX1; ID1; HES1; STAT5B