Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77149 Vorinostat GSE92742 NKDBA Human 24h 1.1111uM EID0446
Types Number Response transcription factors
Up-regulation 180 NEDD8; BHLHE40; CTR9; ORC2; PIAS2; TBP; NCOA4; JARID2; ZBTB18; ZNF189; HDAC2; KDM5A; ING2; LPIN2; TSC22D1; PPARG; MED4; MYC; HLTF; CEBPZ; EED; ZNF143; TSC22D2; ATF1; ZNF443; SP110; PSPC1; MAX; NRBF2; ZMYM2; MYCBP; ELK3; ZNF410; CRY1; SATB2; PHF8; CREG1; NFIB; ERG; RARA; MAF; DNMT3B; TCEB2; NRIP1; RBBP4; ARID4A; SNIP1; TRIM32; C1D; RBBP5; FOSB; FOXO4; MSX1; ZNF267; SMAD2; DRAP1; BBX; KDM2A; ZBTB11; MLX; CDK8; KAT7; SOX4; ECD; MED6; HMG20A; MITF; SAP30; EGR3; SNW1; SMARCA5; HDAC1; AFF1; PHF20; HCFC2; TBL1XR1; RBPMS; SETD3; BRPF1; ERBB2; PIR; RBBP7; RNF111; SALL1; ETS2; TBL1X; BTAF1; SMARCA4; DNAJC1; TAF1D; RBM14; CRK; DPF2; NPAT; RUVBL2; SAP18; MAFG; TAF10; BRD2; SMAD7; MEOX1; CBX3; REST; PLAGL2; ELF1; ZNF468; PCGF2; TCF12; FHL2; RLF; YWHAB; TBPL1; BCL10; TCFL5; ZNF281; ID2; BMI1; HSF2; BATF3; BRD3; AHR; WWTR1; PURA; TOB1; GTF3A; NFAT5; MTF2; SATB1; HSBP1; LEF1; PPARGC1A; ATF3; GATA3; VEZF1; EMX2; RBPJ; YBX1; ZMIZ2; TLE1; NUP62; RNF6; BRD8; SIX1; SMARCE1; XBP1; BASP1; FOXG1; ARID4B; FOXJ3; TSC22D3; RNF4; NR2F2; BIRC2; WWC1; EDF1; RHOA; CERS6; ENO1; ZNF146; CCNC; NONO; KLF2; STAT1; MAGED1; SMAD3; SMARCA2; KDM5D; NCOR2; BRD4; PRKDC; KAT6B; FOS; PAX8; HMG20B; PSIP1; MXI1; MAFB; HMGA2; HOXB7; SCAND1
Down-regulation 129 TFAP2A; FOXM1; TAF6L; ATN1; TRIB3; ZNF232; ARL2BP; KLF3; E2F4; CEBPD; ZNF180; CEBPG; FOXE1; RARG; BARX1; SIX6; ZIC3; EN1; ZXDC; ZNF43; MEIS2; CDIP1; MYBL1; TCF7L1; NCOA3; PHIP; ZNF117; BNC1; ZNF219; CTCF; VGLL1; PTRF; THRB; ZNF665; RAD21; TRIM29; ILF2; ATF5; TEAD4; WNT4; NEUROD1; FOXF2; SOX2; ZNF688; AES; PBX3; ETS1; DLX2; OVOL2; ZHX2; LHX3; EHF; ZNF264; BCL11A; ZMYND11; TCF21; PRRX1; KLF11; PRDM2; KAT2B; LIN28A; CCNE1; TP63; PIAS4; HMGB1; AEBP1; ZNF711; IRF6; GATA6; GLI2; ZNF589; NFATC3; TFCP2; HOXB13; POU2AF1; ARID1A; TFAP2C; CBFA2T3; IRF9; GTF2I; PAX6; ID4; GMNN; CTBP2; MYBL2; ACTL6B; SHOX2; SOX17; NFATC4; ZNF195; DLX5; E4F1; JUP; TFDP1; ZNF85; ST18; SOX13; PBX1; ELF5; CHD9; ERBB4; GRHL2; ZNF331; TULP3; POLR3C; CDK2; PSMC3; CITED1; TCF7L2; ZSCAN18; SOX9; EPAS1; NKX3-1; HMGB2; SNAI2; ID1; MYRF; DMTF1; KLF13; PAX5; SALL2; ZNF512B; ZNF91; TRPS1; JAK2; ZBED2; SOX11; SPDEF; VPS72