Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77137 Trichostatin-a GSE92742 NKDBA Human 24h 1.1111uM EID0446
Types Number Response transcription factors
Up-regulation 114 BHLHE40; FOXO4; KDM5A; TCEB2; BRD2; MXI1; EYA1; SND1; HOXA5; DNAJC1; TSC22D2; MYOG; GMEB2; BCL3; SOX4; SP110; RBBP5; HEY2; NEDD8; SNIP1; TRIM16; CREG1; CUX1; SUPT4H1; MYCBP; JARID2; MED1; ATF6; KDM2A; TFDP2; FOXO3; CREB5; ALX1; BRPF1; RUVBL2; SIRT2; TBP; NAB1; SETD3; MECOM; PKNOX2; PHF1; EDF1; ZNF302; DRAP1; BTG1; GATAD2A; ZNF212; TBPL1; HOXA10; DDX5; RBBP4; PPARGC1A; LPIN2; HSBP1; SCAND1; SMAD6; RHOA; DACH1; KLF9; ZNF593; BCL6; SATB2; HDAC1; MEF2C; BBX; HMG20B; MBD2; TSC22D1; PHF20; MAF; HIVEP2; NCOA1; RCOR1; MYC; ENO1; RBPJ; ASH2L; MAFB; PURA; ZNF281; SMARCA1; NCOA4; NFAT5; SIX1; HLTF; WWC1; FOSB; BASP1; CRK; ATF3; HDAC4; NR1D2; MITF; KAT6B; PAX8; TOB1; PBX1; MAFG; PITX1; FOXG1; NFATC3; MED13; SIX2; VEZF1; HEY1; YWHAB; EMX2; ZNF331; WWTR1; ID1; PRKDC; PEG3; TLE1
Down-regulation 123 FOXM1; CAPN15; TTF2; CCNA2; TRIP6; HMGB2; SUV39H1; ATF5; YEATS4; HMGB1; ZIC3; CIZ1; SP140L; ARL2BP; IFI16; E2F1; MYBL1; BNC1; TRIM22; PRMT2; PCBD1; ZNF141; IRF3; DEK; ATN1; RBPMS; NR5A2; NEUROD1; BACH1; RAD21; CBX5; HDAC9; ZBED1; ILF2; PLAGL1; ETS1; OVOL2; FOSL1; TGFB1I1; TCF7L1; PGR; ELF4; TRIB3; RARG; NFYB; ST18; TCF3; POU2AF1; TAF1A; ZNF33B; PHIP; THAP10; MDM2; ZNF219; PAX5; ZHX2; CBX3; KAT2B; RNF138; MYBL2; LIN28A; TLE4; PTRF; HOXD1; EN1; CDIP1; BRCA1; HOXB2; SOX17; ZNF282; VGLL1; FOXF2; TAF9B; ZNF589; HOXB6; DNMT1; SOX13; C1QBP; EHF; SMARCD2; STAT6; TP53; CENPF; SIAH2; MEIS2; HIPK1; ZBTB16; ZNF43; SNAI2; PRRX1; PTTG1; EGR2; MLXIP; ZNF117; AEBP1; IRF8; RORA; CBX7; ELF5; KLF5; RBBP8; KLF4; ZSCAN18; GATA6; SLC2A4RG; SOX2; HOXB7; RRN3; MEIS1; SHOX2; SPDEF; CBFA2T3; SPIB; ZNF217; INSR; TFAP2C; BAZ1A; BCL11A; DLX2; CITED2; ERBB4; LEF1; E2F2