Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77133 Menadione GSE92742 NKDBA Human 24h 1.2906uM EID0447
Types Number Response transcription factors
Up-regulation 214 IRX5; HOXC6; ING3; PURA; HOXC10; ORC2; PPARG; MEF2A; SIAH2; NFKBIB; HMG20B; BCLAF1; TSC22D1; NEDD8; RBM14; MAGED1; MYOD1; ING2; MED1; ID2; BHLHE40; POLR2A; KAT7; CCNA2; CREG1; NFKB1; DNMT3B; HLTF; IKBKAP; PCBD1; NFIL3; EDF1; RUNX3; RNF14; BMI1; MED24; ELK1; UIMC1; PSPC1; CRY1; ZNF443; IRF5; HMGA2; ZBTB32; DNAJC1; SNW1; CHD3; REPIN1; TRIM16; RNF141; ZHX3; FOXO4; BAZ1B; CARHSP1; RBL2; EZH2; PTTG1; RNF10; TBP; NFAT5; SMARCD1; MLXIPL; HOXA10; SMARCD2; CRK; HTATIP2; SUV39H1; NR1D2; NR2F2; SP110; HMG20A; RHOA; TCF15; EED; DBP; CNOT1; ZBTB40; BRPF1; CEBPA; ARID4A; ERBB2; TLE1; VGLL4; PUF60; SMAD3; SOX4; BRD8; BLM; ZBTB24; PIAS3; SMARCA4; CTR9; TCERG1; BRD2; PHF2; TSC22D2; RBBP7; PIAS2; NKX3-1; NFKBIA; WWTR1; DEAF1; TRRAP; DDX54; MSX1; SFMBT1; SIX1; TRIP6; ZBTB11; TSC22D4; RELB; KDM2A; SCMH1; KDM5A; DNAJC2; AFF1; MED23; SKI; HOXA7; TADA3; USF2; HIVEP2; TAF1D; ENO1; BATF; SAP18; FOXC1; COPS2; TBL1X; SND1; ZBTB18; UBP1; RUVBL2; CENPF; DRAP1; KAT6B; MED6; EP400; KLF6; CCDC59; SMARCA2; NCOR2; SIM2; SLC2A4RG; PCGF2; KAT6A; FLNA; MSC; ITGB3BP; ATF1; NCOA6; MAZ; FOSB; CHD9; NUP62; ERG; ZNF23; TSC22D3; TBL1XR1; MYCBP; FOXL2; NCOA4; LEF1; ZNF189; BATF3; BCL3; TFEC; NFATC3; CREB3L1; SREBF1; BRD3; PDLIM1; SATB2; ZMIZ2; FOSL1; CBFB; MYC; NFIB; SOX9; FOXD1; STAT6; RBBP4; ZBTB38; SMARCA1; PHF8; PIR; ZNF226; FOSL2; HSF2; KLF9; HSBP1; TCF4; JARID2; FOXO3; ZSCAN31; TRIM28; SP100; TAF10; KLF2; MAF; TP53; RNF6; BASP1; NRIP1; EMX2; BAZ1A; HOXA5; HOXB7; BIRC2; IRF7; TXNIP; SCAND1; MAFB; EGR1
Down-regulation 158 ARNT2; TFAP2A; LIN28A; CEBPB; TRIB3; HOXD1; ZFPM2; NANOG; MYBL1; PRDM14; ZNF232; PRDM10; PRRX1; MED14; TP63; ZNF835; SRY; BNC1; TOX; POU2AF1; ZNF695; ZNF268; SNAI2; SOX3; ZNF816; CHD2; RBFOX2; IFI16; INSR; ETS1; LHX2; PRDM12; GMNN; ZFP69B; ZIC3; ZNF423; ZBTB44; MEIS2; BNC2; SOX21; MNDA; ZMIZ1; ZNF215; ZNF195; ZNF532; ZNF711; TP73; HDAC9; ZNF682; SOX13; ATN1; SOX17; SALL1; RAD21; ZNF257; ST18; NR5A2; ID1; NFATC4; TFDP1; PRDM2; SALL2; ZNF141; FEZF2; ZNF93; TTF2; ZNF239; TFAP2C; FOXF2; ZNF180; ERBB4; TERF1; ZNF675; BARX1; PHIP; HIRA; SIX3; TCF7L1; ZNF623; ZNF91; BRD4; ZNF85; SMARCB1; SUPT3H; ZNF665; ZNF589; ELK4; NCOA3; LHX3; ZNF500; SOX18; POLR3C; ZNF544; TEAD4; MYRF; THAP10; BACH2; NEUROD1; MED17; ISL1; TBX1; PCGF3; SHOX2; ZNF611; TRPS1; SOX2; ID3; CEBPD; CSDE1; HHEX; ZNF117; HIC2; ZEB1; KLF7; KLF11; SPDEF; FOXO1; ZNF573; EGR2; DLX5; TCF7L2; SOX10; ZFP36L2; SOHLH2; HIPK1; ZHX2; HOXB2; MYCN; ZNF43; CTBP2; KAT2B; FOS; SOX11; TRIM29; HEY1; GFI1; GATA6; ZBTB16; WT1; ZNF415; ZNF331; ATF3; ARID5B; IRF6; TLE4; PSMC3; TULP3; ZNF512B; IRF9; CDIP1; VPS72; ID4; CUX2; PBX3; CBFA2T3; OSR2; NR4A2; KDM5D