Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77092 Vorinostat GSE92742 NKDBA Human 24h 10uM EID0447
Types Number Response transcription factors
Up-regulation 186 CREG1; SND1; TCEB2; MXI1; NEDD8; PURA; TSC22D1; RCOR1; CTR9; IKBKAP; SMARCD3; HMG20B; HLTF; RB1; RUVBL1; SETD3; HABP4; ZKSCAN5; KDM5B; SIX1; TBP; IKZF5; MYOD1; ID2; ORC2; RUVBL2; ZBTB18; RUNX3; CRK; ZBTB48; SAP18; TRIM16; SOX4; NFKBIB; TCFL5; TSC22D4; IRX5; EDF1; CHD1; SNAI1; PPARG; HDAC2; FOXO4; RARA; EED; ZSCAN5A; CRY1; ZNF212; MMS19; RBBP5; ING3; ECD; ZSCAN32; RHOA; BRD2; HDAC3; BHLHE40; RNF141; ZBTB40; POLR2A; KDM2A; FOSB; CEBPZ; KAT7; NR3C2; FOSL2; STAT1; ZBTB11; RUNX1; BCL3; SATB2; PSMD9; ZNF443; ARID4A; EZH2; PIAS2; SIRT7; MED6; SNIP1; DBP; RXRB; HIVEP2; TAF12; JUNB; TAF1D; HSF2; MED23; ZNF266; NPAT; TOB1; BMI1; IRF4; TRRAP; SIN3B; HOXC6; ASH2L; DNAJC1; CASZ1; KDM5A; SMARCA2; PPARGC1A; MEN1; NFAT5; MYCBP; HDAC1; MED1; NFATC3; ELK3; RFX5; TAF10; JARID2; PSPC1; DRAP1; MAGED1; EYA1; SMARCA5; URI1; UBP1; ZNF226; NRBF2; KLF12; ADRB2; ZNF468; REPIN1; ITGB3BP; NCOA4; CERS6; ZKSCAN1; ETV5; STAT3; BRPF1; PHF1; SPEN; HOXA5; HOXA10; ZNF394; PRKDC; SMAD2; ATF3; FOXC1; MED24; ZNF593; PITX1; ARID4B; FOXO3; NCOR2; NCOA1; MKL2; TRIM28; LEF1; HTATIP2; MLX; CREM; NR4A3; USF2; TSC22D2; ZMIZ2; BATF3; RERE; PHF20; ENO1; PCGF2; CUX1; AFF1; LPIN2; FLNA; ZEB2; BRD8; ZIC1; EGR3; NR4A2; ZNF331; HDAC4; IRF7; SIX2; EYA2; CRYM; TBPL1; MAFB; BASP1; SCAND1; PEG3; MAF; KLF2; THAP11; NR4A1
Down-regulation 207 FOXM1; LIN28A; IFI16; ARNT2; BNC1; TRIB3; FHL2; HMGB1; TFAP2A; ARL2BP; ATF5; CEBPD; BRCA1; BNC2; OVOL2; ZFPM2; HDGF; DEK; CCNA2; LHX2; ZIC3; MYBL1; SOX17; CEBPG; TEAD4; ELF4; RAD21; RAN; E2F4; HOXD1; TFDP1; HMGA2; HMGB2; CTCF; ZNF219; CDX1; SMAD1; ETS1; EN1; ZNF232; YBX3; ZBTB16; NEUROG2; PMF1; PRDM14; ZFP36L2; TCF3; SOX21; NEUROD1; SALL1; MYBL2; WHSC1; BACH1; HIRA; PTTG1; ZBED1; TP73; ZFP69B; E2F1; MEIS2; HMGB3; CENPF; TGFB1I1; POU2AF1; SRY; CAPN15; ZNF74; VGLL1; TCF7L1; GFI1B; EWSR1; ZNF180; FOXE1; FLI1; PCGF3; HOXD3; ZNF141; ZNF345; TFAP2C; PLAGL1; KLF3; BARX1; SOX18; HDAC9; SMARCB1; FOXF2; IRX4; ZNF532; ELF5; PTRF; ZNF33B; SOX13; PRRX1; XBP1; TP53; FOSL1; KLF11; HOXB2; POU4F3; DDX17; RFX7; ILF2; ZNF682; TULP3; ARID3A; SUPT3H; ZNF215; NCOA2; PBX3; TCEA1; PSMC3; SOX3; CTBP2; ZBTB20; HOXB5; SPI1; ZNF675; ARNTL2; TRIM22; BCL11A; CSDE1; ZHX2; DNMT1; PHIP; NFATC4; SP140L; BPTF; TTF2; ZNF91; HNRNPD; TOX; TP63; SPDEF; KAT2B; TAF9B; ZNF264; SNAI2; ATN1; INSR; CNOT6; TCF21; CDIP1; POLR3C; CNBP; KLF7; ID1; ID4; SUV39H1; PGR; HOXB6; YEATS4; ZNF43; SIX3; ZMYND8; ST18; ZNF117; ZNF93; ZNF165; ZEB1; TAL1; ZNF85; ETS2; EHF; GRHL2; INSM1; TGIF1; RNF138; ZBED4; SUZ12; ZNF665; PAX6; PRMT2; ZNF611; GATA6; LHX3; ZMIZ1; NKX2-1; ZNF83; RBPMS; SOX2; SHOX2; SOX11; ZSCAN18; SOHLH2; ZNF573; IRF9; ZNF512B; VPS72; KLF5; KLF6; KLF13; TRPS1; HHEX; NR2F1; HOXB7; FOXN3; CBFB; WT1; ZBTB38; HMGN3; CREB1; MEIS1; ESR1; NR1H2; PBX1; ERBB4; NR2F6