Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID77082	Trichostatin-a	GSE92742	NKDBA	Human	24h	10uM	EID0447

Response Information :

Types	Number	Response transcription factors
Up-regulation	175	IRX5; TCEB2; KDM5B; HMG20B; NEDD8; ID2; SND1; MYCBP; TCFL5; HLTF; SETD3; MXI1; RUVBL1; CREG1; MYOD1; CRK; PITX1; ZBTB48; RUVBL2; RUNX3; BRD2; CTR9; SAP18; TBP; PURA; ORC2; RCOR1; ZBTB18; FOSB; NFATC1; SMARCD3; IKZF5; ZNF536; PHF1; NR2E1; HDAC3; NFKBIB; JUNB; NFIL3; ZNF266; ATF6; FOXO4; ZSCAN5A; ECD; HABP4; SNIP1; SIX1; PIAS2; ING1; RBBP5; ASH2L; ZNF692; RHOA; HSF2; KDM5A; CHD1; ISL1; SOX4; RNF141; ZNF226; MEOX2; MED23; IKBKAP; AIP; HEY1; EDF1; ZNF324; NR3C2; URI1; STAT1; TRIM16; FOXC1; PPARGC1A; ZBTB40; SREBF2; ZNF212; STAT5A; ATF3; MED6; BRPF1; ZNF14; SIRT7; HDAC1; KAT7; JARID2; RBL2; MED24; BCL3; DRAP1; MLX; ITGB3BP; DBP; TSC22D1; NFAT5; DNAJC1; NRBF2; BRF2; ZNF331; ARNTL; RXRB; ZBTB11; KDM2A; TOB1; CITED2; BRD4; SREBF1; PEG3; SMARCD2; FOXL2; BCL11B; ING2; ZNF468; UBP1; ZNF23; EYA1; ZKSCAN1; ZBTB24; LHX6; NPAT; CEBPA; CUX1; IL16; NFYC; CREM; POLR2A; CRY1; HIVEP2; WWTR1; ZNF593; CRYM; ZNF394; RELB; STAT3; USF2; TAF10; FOXO3; IRF8; TRIM28; TADA3; HSBP1; ETV5; SMAD2; MED1; JUND; NR2F2; ADRB2; PIR; PHF20; SATB2; NKX3-1; ZMIZ2; RBBP4; SMARCA1; TBPL1; ASCL1; MAGED1; NR4A2; TOX3; BMI1; FLNA; PCGF2; YWHAB; MITF; NR4A1; SMARCA2; TBX3; SUB1; HOXC6; RFX5; ZIC1; KLF2; LITAF; EGR3; MAF; MAFB
Down-regulation	238	IFI16; FOXM1; FHL2; LIN28A; ARNT2; ZFPM2; TRIB3; MYBL1; HOXD3; ZBTB16; TEAD4; NCOA2; TFAP2A; HDGF; SOX17; BNC1; DEK; ARL2BP; ZFP36L1; ARNTL2; ATF5; NRIP1; BACH1; SALL1; ZHX2; KLF8; PAX8; SOX13; CCNA2; ZBED1; NEUROD1; SMAD1; DCC; OVOL2; SMARCB1; CARHSP1; ZIC3; CTCF; ATN1; BNC2; HMGB1; PMF1; SP140L; TCEA1; MED14; PCBD1; PTTG1; TGIF1; RAD21; CEBPD; ZNF232; BRCA1; YBX3; OLIG2; VGLL4; E2F1; SOX18; CENPF; ZNF532; XBP1; PRRX1; MYBL2; PCGF3; WHSC1; WT1; EWSR1; TAL1; ZBTB20; ELF4; SKIL; ZFP69B; POU5F1B; TRIM22; CHD7; BRCA2; CEBPG; NEUROG2; HMGB2; BPTF; FOXE1; HOXB2; PRDM14; TULP3; TCF7L1; NR1H4; ZNF219; SOX3; KAT2B; CTBP1; NCOR1; SMAD3; E2F8; ZNF345; FOSL1; HOXD1; TCF3; ZBTB1; HOXB5; ZNF675; EN1; ZNF74; ZFP36L2; ZNF682; ZNF12; ZMIZ1; FLI1; VGLL1; DDX17; BCL11A; KLF7; ZNF141; ZMYND8; BACH2; AGO2; YEATS4; ARID3A; SUV39H1; HIRA; TP53; ABL1; CBX5; ETS1; HOXB6; MYCN; SMARCC2; CNOT2; PTRF; MEIS2; ZNF264; PHIP; POLR3C; ADNP; MED17; HNRNPD; ZNF215; NFE2L3; POU2AF1; RFC1; ZBED2; RBBP8; ZNF33B; AR; DNMT1; ZNF623; HMGB3; HOXB7; SUPT3H; PRPF6; KLF11; RBPMS; NFATC4; SNAI2; ZNF22; FOXO1; RAN; TGFB1I1; KLF3; SOHLH2; YEATS2; TSC22D3; ZNF93; TCF12; ZBED4; HDAC9; MDM2; ZNF611; HIPK3; CHD9; NFE2L2; ZEB1; HOXB9; LOXL2; ZNF117; TFAP2C; ZNF43; NPAS2; IRF9; SAP30; CNOT6; CTBP2; AEBP1; ID4; ZNF711; MECOM; TRIP6; PSMC3; PGR; GMNN; ZNF107; MYRF; VPS72; FOXG1; VEZF1; RNF138; YAP1; EHF; HMGN3; GFI1; PBX3; PLAGL1; SUZ12; ID3; HEY2; ZNF423; SOX11; FOXF2; FOXI1; ZNF665; ZNF85; ST18; SP3; PAWR; SPDEF; TAF9B; TLE4; ESR1; STAT6; PAX6; ZNF217; HLX; CDIP1; LMCD1; CREB1; HMGA2; ID1; MEIS1; EMX2; DMTF1; ZBTB38; CUX2; SOX2; BHLHE41; KLF5; ZNF91; ZSCAN18; ERBB4; KDM5D; NR2F6