Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID77040 Vorinostat GSE92742 NKDBA Human 24h 3.3333uM EID0445
Types Number Response transcription factors
Up-regulation 210 ID2; STAT1; SMAD7; SIX1; MTDH; IKBKAP; BBX; TRIM22; FOSL2; RNF111; NRIP1; EGR3; ZNF329; ZMYM2; CHD1; CTR9; TAF10; CRY1; SKI; CREBL2; RAN; SMAD2; ZNF189; EED; ZSCAN18; UBE2B; HOXA5; BCL10; KLF9; CREB3; TSC22D3; TERF1; ADRB2; PHF20; WWP1; NR2F1; CTBP2; ELK3; ZBTB11; RNF6; SFPQ; ZNF143; ATF1; SMARCA2; TEAD1; MTF1; USP22; HOXA1; CBX3; TAF9; KLF10; ZEB2; PSIP1; ZNF623; TLE1; NR4A2; HES1; MDM2; ATF3; SAP30; MED4; NR4A1; NPAT; MEN1; FOXJ3; HOXA10; SPEN; HIPK1; CRK; NFYB; HIF1A; RBBP8; NR3C1; NLK; TERF2; THAP10; MAX; DNMT3B; RBBP5; NPM1; HMG20A; PRKDC; SUPT7L; LEF1; RNF138; VDR; ATF2; HLTF; NFKB2; HABP4; ENY2; CUX1; RB1; ADNP2; ZNF217; NRBF2; ZNF304; TFAM; SMARCD3; HEY1; TAF4B; ZNF536; ZBTB1; TSG101; TSC22D1; SMAD5; NR2C1; BAZ2A; ARID5A; JARID2; ITGB3BP; EGR2; ZNF160; AHR; NUP62; ZNF468; E2F5; SMAD4; IKZF5; CCNC; YBX1; UBP1; TBX3; NKRF; ZNF587; ZNF24; LPIN2; REST; MEOX1; HDAC6; MED7; BMI1; INSR; MYCBP; HIVEP2; MYC; NCOA4; PIAS2; TAF11; ACTL6A; CHD9; ZNF7; DMTF1; ASCL1; TCFL5; CREB5; E2F3; ZNF331; TGFB1; PAWR; BASP1; BIRC2; JUNB; IRF8; NFIB; CERS6; SPDEF; NEDD8; MNAT1; MTF2; TCF12; ZNF443; WWC1; TCEA1; ZNF23; NR3C2; REPIN1; ZKSCAN1; ZNF721; HMGN3; ECD; ASH2L; MBD2; RAD21; RBPMS; ZNF146; TOPORS; IRF9; ZNF281; ZBTB18; FOXC1; CREG1; WWTR1; ETV5; HMBOX1; HDAC2; IRF7; SMAD3; FOSB; HOXD1; NFAT5; WT1; ID3; TOX; YWHAB; KLF2; GLI2; EYA1; TOB1; TRPS1; SNAI2; DNMT1; PBX1; TBL1X; MAF; RORA; THAP11; HDAC9; TSC22D2; NR2F6
Down-regulation 218 FOXM1; TP53; FOSL1; ATF5; WHSC1; TTF1; NFKBIA; PRPF6; ID1; SLC2A4RG; NFE2L3; GATA4; ZNF444; ABL1; RBL1; GMEB2; RFXANK; E2F1; OVOL1; E4F1; TCEB2; CCNA2; KMT2B; MXD3; GFI1; CHAF1B; ZNF133; CARHSP1; SOX21; FOXL2; TLX1; MED16; E2F8; ZSCAN32; HEYL; ZNF282; ARNTL2; KLF4; HMGB1; PRDM13; FOXA2; ZNF35; SUV39H1; ING4; ZNF211; EZH2; PHOX2B; RBM39; FOXD1; BATF; SOX11; PMF1; FOXO3; EN1; HHEX; CTCF; POU2F2; NKX3-1; ASH1L; POU2AF1; HMX1; NFX1; CEBPG; PHF1; FEV; ZNF426; E2F2; CENPF; TCF25; PHIP; HOXC4; NFKB1; NKX2-8; PROX1; ELF5; ZNF227; NKX3-2; PITX2; ZNF93; SIM2; ZNF177; ZNF408; SUPT4H1; RFC1; KLF5; SSRP1; CDX1; ZNF32; CCNE1; TAF12; IRF4; TRIM25; FOXF1; PITX1; NAB2; RHOA; HDGF; AIP; LHX3; PCGF1; PGR; NCOA6; ZNF335; PTRF; RXRG; BARX2; BCL11A; ZNF787; BTG1; PSMC3; HIPK2; MYBL2; ZNF219; TAF9B; CD3D; ELF3; PHOX2A; TBP; ZNF43; MSC; PRDM10; ZNF75D; STAT6; MECOM; RBPJ; PFDN5; FLNA; SMARCC2; YBX3; CHD3; SFMBT1; MAFB; MYF6; ZFP36L2; SP140L; CEBPE; JAK2; HMGB3; ZFY; NFKBIB; FOXE1; MZF1; NFATC1; PCGF3; KLF11; EYA2; WNT4; PAX9; PSMC3IP; ALX1; ZMYND11; AR; HLF; KLF7; PBX3; ATOH1; SIAH2; NR1I2; DDX17; POLR3C; HOXB5; NKX2-1; ZNF688; ZNF232; PTTG1; HAND1; PAXBP1; SSBP3; CREB3L2; LIN28A; VGLL4; CDIP1; PQBP1; PRDM2; ZSCAN31; UBE2I; SOX9; ZNF136; BARX1; ZNF264; VGLL1; ZEB1; HIRA; MYCN; IRF6; CSDE1; SETDB1; MYB; NFIL3; MED17; ZXDC; MLXIP; ST18; BCL3; HOXA11; ZHX2; PLAGL2; TRIM28; HMGB2; ZFPM2; ZNF512B; SMARCB1; MYRF; GRHL2; KDM5D; MED1; SCAND1; TCF4; ZNF532; HOXC6; DLX2; BCL11B; ELF1; ID4; ETS2; ZIC1; EGR1; MEIS2