Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID76967 Tretinoin GSE92742 NKDBA Human 24h 1.4815uM EID0442
Types Number Response transcription factors
Up-regulation 268 PUF60; TBP; TRIM32; NONO; BRD8; NUP62; EDF1; BCLAF1; NFKBIA; PMF1; ZMYM2; FHL2; DRAP1; MMS19; BHLHE40; ELK1; HLTF; KAT5; PCGF2; ELK3; XBP1; HOXC6; SUV39H1; EZH2; SNW1; TRIM28; ZNF212; PATZ1; RBM14; MYCBP; MED1; RUVBL2; PAX8; RFC1; PIR; PSPC1; MAGED1; RNF4; MLX; SOX4; SMAD3; LPIN2; KAT7; ENO1; HMG20B; RBBP5; NR2F2; CHAF1B; MED4; IKBKAP; ZMIZ2; PHF20; SCAND1; TBL1X; TCEB2; RBL1; SFMBT1; WHSC1; BRPF1; TBL1XR1; NCOA4; ZNF292; RNF111; TCERG1; RHOA; GTF3A; SMAD2; YWHAB; ABL1; ZNF189; KDM5A; ZFP64; NFYC; NCOA6; AFF1; DDX5; ZFHX4; SMARCA4; ATF4; BRCA1; JARID2; ORC2; NPAT; RBPMS; RBBP7; ZBTB24; ELF3; NRBF2; NCOR2; ZNF16; PIAS2; REST; DNMT3B; SETD3; ZNF148; CEBPZ; SREBF1; TAF1D; NEDD8; FOXD1; BRD3; UIMC1; TSC22D2; CNOT2; TRIM16; ING3; PIAS3; SP110; HSF2; HOXD10; EP400; BIRC2; CENPF; ECD; USF2; MGA; RBPJ; HDAC3; TRIM27; ZNF652; ASXL1; SNIP1; KDM5D; MYC; ZNF200; ZNF764; HOXD9; PPARG; ZMYND8; PHF8; BATF3; C1D; CHD1; PIAS1; E2F6; DEAF1; TRIP4; PLAGL2; KAT8; FOSL1; HOXA7; MED23; RBBP4; DNAJC1; ZNF184; HNRNPD; CBX3; BAZ1A; RNF14; NKX3-1; SMARCE1; HMG20A; VEZF1; TGFB1I1; TCF12; ZNF226; CCNA2; MEOX1; NFE2L1; ZNF384; FOXO4; ZNF408; ARID4A; ZBTB20; TBPL1; ZNF473; YBX1; TLE1; UBE2I; LOXL2; HMGXB3; FOXO3; ZNF143; VGLL4; MED16; BRD2; HCFC1; BMI1; UBE3A; MED24; HOXB7; FOXJ3; ZBTB18; NFRKB; MED27; SOX12; ERCC3; ZNF721; TSC22D1; SETDB1; BASP1; DPF2; CENPB; NFIB; UBE2B; HDAC1; ZNF410; SETD2; BTF3; RB1; SP100; ELF1; MEOX2; CTR9; MAFB; CREB5; MKL1; KMT2A; HMGB3; GTF2IRD1; PCBD1; AATF; MAZ; MITF; PCGF1; ZNF248; MAF; ING2; RAN; MEIS1; HDAC6; PTTG1; SATB2; RUNX3; MECOM; SAP18; RERE; PSMD9; AIP; TLE4; TCF7; BAZ2B; HMGXB4; CARHSP1; SMAD1; CTNNB1; SOX11; ZNF587; SERTAD2; MTF2; ERBB2; TP53; SUPT4H1; PLAGL1; CLOCK; EMX2; TFDP2; ZNF593; RNF10; RFX5; SUB1; SMARCA5; WWTR1; RREB1; TRIP6; WWC1; ZNF302; NPM1; PFDN5; ARID4B; SMARCD3; MYB; SAP30; TSC22D3; TOB1; HOXA5; LEF1; SOX9
Down-regulation 288 EHF; ZNF331; CREBL2; IRF9; IRF6; PEG3; ZSCAN18; MEIS2; RAD21; SNAI2; NR1H2; ZNF665; AEBP1; JUP; FOXF2; ZNF232; SPDEF; SALL2; CBFA2T3; ARL2BP; E2F4; CDIP1; ZNF117; EGR3; PRDM14; TFAP2A; TRPS1; TRIB3; TP63; ELK4; CAMTA2; ERBB4; RARG; ZNF195; ZNF816; SNAI1; GATA6; NFATC4; TCF3; TAF1C; DLX5; FOXH1; PRRX1; LHX3; TERF1; VGLL1; EMX1; ZNF667; ETS1; KLF3; GRHL2; SOX15; CDK9; CNOT3; ZNF91; SOX17; SOX2; NFYB; CAPN15; SRY; TAF5L; TBX21; TFDP1; ZNF556; KDM5C; TCEA1; MED21; BARX1; MYRF; ZNF74; ACTL6B; ID4; PRDM12; ATN1; HIPK2; ZNF223; GBX1; ZNF225; TCF21; SOX13; ZNF345; ID3; CREM; SPEN; ZMYND11; SUPT3H; ST18; GATA4; ZIC3; BNC2; TGFB1; TP73; ZNF154; ZNF654; ZBED2; SUMO1; SHOX2; SIX6; USP22; CREB1; PITX1; CSDC2; DACH1; SKIL; CIZ1; TDP2; TLE2; CEBPD; TAF1; CBX7; MBD1; NR4A1; THRB; ZNF571; ZNF589; HEY1; ZNF350; TGIF2; BRWD1; SRF; NHLH1; SUPT7L; KLF5; NR4A3; MLLT10; TAF6L; CUX2; OLIG2; EN1; OVOL2; KLF13; ZNF140; TOX; CBX4; ZNF75D; VDR; SKI; NFATC3; THRA; ZNF155; GTF2I; GABPA; IRF1; HIC2; ERF; HMGB2; TULP3; HOXA6; ZSCAN9; ZNF273; FOXA2; HSF4; ZNF180; AES; ZFP69B; TAF4B; NR4A2; BACH1; FOXE1; SOX3; PGR; KLF9; DMTF1; HLX; KAT2A; TBX1; ASCL1; ZNF141; TCF7L2; ZFHX3; CALR; TRIM22; PAXBP1; RNF138; ZNF415; TOX3; LIN28A; HIRA; HDAC9; ZNF253; ZNF268; NAB2; E2F5; MECP2; IRF8; SSBP3; FOS; JUNB; TFCP2; TXNIP; PRDM1; HIPK3; ZNF124; RBBP8; ZIC1; NR2F1; TLX3; BNC1; ZNF85; ISL1; ZNF134; ZNF257; PAWR; ZNF562; NR2F6; TEAD4; ZNF43; NANOG; ZNF235; ZNF10; IRF4; SPIB; PAX6; NEUROD1; IL16; INSM1; PSMC3; FOXC1; ZNF623; PRDM2; HSF1; PPARD; MYBL2; MDM4; TERF2; INSR; CCNH; PNRC1; FLI1; SOX10; ZNF131; ZNF682; THAP10; ZNF528; NR0B2; ZKSCAN1; CDX1; FOSL2; FOXG1; ZNF175; ELF5; ZNF93; ZNF432; NFE2L2; ZNF177; HOXB13; GLI2; PTRF; MLXIP; BHLHE41; NCOA3; ZHX2; NRIP1; TTF2; ZNF586; TCEA2; MDM2; SOHLH2; PLAG1; TFAP2C; PAX5; TDRD3; ZFPM2; NR5A2; MYCN; EGR2; TCF7L1; BCL11A; MYCL; ZNF329; ZNF512B; MAFF; SSBP2; HBP1; TAF9B; TRIM29; EPAS1; JAK2; OSR2; ID1; STAT1; VPS72; DLX2; HHEX; PBX1; KLF4; ATF3; HOXB2