Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID76966	Tretinoin	GSE92742	NKDBA	Human	24h	4.4444uM	EID0442

Response Information :

Types	Number	Response transcription factors
Up-regulation	311	HOXC6; ELK3; PUF60; NFKBIA; TBP; EDF1; NONO; RELB; TRIM32; TRIM28; FHL2; NCOA4; BRD8; SNW1; NUP62; BHLHE40; DRAP1; BCLAF1; MED1; RUVBL2; KDM2A; ZMYM2; ERCC2; EZH2; PSPC1; RNF4; MYCBP; HLTF; RBM14; PMF1; WHSC1; MAGED1; JARID2; NCOA6; DNMT3B; LPIN2; ZNF212; CREG1; CRY1; PAX8; KAT5; SUV39H1; ELK1; SETD3; BATF3; CTR9; RHOA; IKBKAP; ATF4; EYA2; ASXL1; KDM4A; PHOX2B; PCGF2; SMAD2; NCOR2; TCERG1; KAT7; CHAF1B; CENPF; YWHAB; DDX5; SCAND1; SOX4; PLAGL2; ZMIZ2; ZFP64; NKX2-2; PTTG1; NRF1; ING2; USF2; RFC1; ZNF516; UIMC1; BRCA1; TRIM16; MLX; PIAS2; BRPF1; NFYC; NRBF2; POU3F2; PIR; ALX1; ZFHX4; ABL1; GABPB1; KDM5A; ING3; MMS19; AFF1; MSL3; FOXD1; DNAJC1; TAF10; NEDD8; HMG20B; ENO1; RNF14; RBL1; YBX1; POLR2A; TCEB2; RBBP4; RBBP7; ELF3; MAZ; RFX5; ZNF384; NFKB1; IRX5; ARID4A; CNOT2; PIAS3; SNIP1; BRD2; DEAF1; MSX1; HSF2; ZNF23; XBP1; SFMBT1; SMARCA4; ZNF45; HOXD10; RBBP5; CASZ1; KDM5D; KLF1; ELF1; HDAC7; HIVEP2; ZNF629; ZNF267; ZNF672; SATB2; TBL1XR1; SMARCE1; SMARCA2; BCL3; BRF2; NR2F2; FOXO4; ZNF443; PPARG; SETD2; TGFB1I1; HNRNPD; SREBF1; FOSL1; HMGXB3; RBPJ; HMGB3; MED6; RBM39; BRD3; ERG; ZNF783; CCNA2; HSBP1; BTF3; ZNF184; HOXD9; ZNF143; RNF10; PATZ1; MGA; BMI1; REST; C1D; HOXB7; PQBP1; PHF20; GTF3A; BIRC2; PDLIM1; SSRP1; ZNF410; ATF6; ZNF226; TAF1D; HDAC3; RLF; EP400; TBL1X; CEBPZ; VEZF1; HCFC1; SMAD3; TSC22D2; ECD; ZNF646; ARNT; NR1I2; NACA; RFXANK; ZNF408; ZNF32; PBRM1; HDAC1; FOXJ3; ERBB2; CHD1; ZNF148; MAFB; DPF2; PHF8; AATF; NFRKB; DR1; MAFG; MED23; MAF; CREB3L1; MXD4; FOXO3; TBPL1; TRIM27; NFE2L1; MYC; ESR1; KMT2A; LOXL2; MYB; UBE3A; ZNF335; RXRB; TLE1; ZNF721; GTF2F1; SMARCA5; BAZ1A; NELFB; PRPF6; TEAD3; HEY2; PSMD9; VGLL4; TADA3; BASP1; STAT5A; ZNF652; SMARCC1; ZMYND8; IRF1; SP110; FOXJ1; NKX3-1; SFPQ; PEX2; EMX2; ZBTB18; RUNX3; ZNF281; ZNF302; MED16; CCDC59; HDAC2; TRIP4; SP100; E2F6; PFDN5; TTF1; BBX; SAP30; SND1; YAF2; NAB1; ITGB3BP; CARM1; CTNNB1; RELA; SOX12; SAP18; PCGF1; MED24; CCNC; TSG101; HDAC6; UBE2B; SP3; PA2G4; TCF12; MITF; TRIP6; PLAGL1; TP53; RCOR1; CEBPA; CREB5; ZBTB1; PHF1; SMARCD3; FLNA; TFDP2; SREBF2; NPM1; ARID4B; TCF7; HTATIP2; PARP1; TSC22D1; SUB1; LEF1; TLE4; MEIS1; STAT6; ZBTB38; WWTR1; TSC22D3
Down-regulation	305	MEIS2; CREBL2; BNC2; TRIB3; FOXF2; SPDEF; TFAP2A; CBFA2T3; IRF9; ZNF331; ERBB4; GATA6; RAD21; ZNF665; CSDC2; NR1H2; SRY; IRF6; ZNF232; SNAI2; ZNF500; CDIP1; ACTL6B; EHF; ETS1; CAPN15; FOXH1; HIRA; LHX3; TAF5L; ZBTB44; ELK4; NFATC4; TAF1C; E2F4; CBX7; PRDM14; BARX1; KLF3; CDK9; TCF21; SHOX2; BRWD1; TCF3; PEG3; GATA4; GRHL2; ZNF195; RARG; VAX2; NFYB; TRPS1; ARL2BP; ZNF141; CEBPD; SOX15; SIN3B; EMX1; TBX1; VENTX; THRA; PBX3; ZIC3; MYBL1; ZSCAN18; EN1; TRIM22; ZNF623; TULP3; ZNF74; ZNF816; SOX2; ZNF345; ZNF225; ST18; PRDM12; NR2F1; ZNF140; SOX13; SOX3; SNAPC4; DACH1; TP63; IRF3; VGLL1; SMAD6; SALL2; ID4; SUPT7L; TBX21; ZNF557; ZNF132; ZNF91; TAF6L; TLX3; FEZF2; NEUROD1; TP73; NR1H4; TDP2; HDAC9; ZNF589; THAP10; TERF1; ZFPM2; ZEB1; IRF8; SKIL; HIF3A; GTF2I; ZNF117; SUMO1; CNOT3; RFX1; HOXA6; ZNF614; ID3; ZXDC; NANOG; SOX18; CREB1; ZNF350; HSF4; HIPK2; SKI; SOX21; MED21; ZNF268; JUP; SIX6; CREM; TCF7L2; TCEA1; NAB2; AES; CUX2; NFATC3; ZFP69B; HBP1; SPEN; PAX5; AEBP1; HEY1; ZNF667; ZMYND11; MYRF; E4F1; PAWR; CHD2; LHX1; ZNF682; ZNF85; PAXBP1; TFAM; LHX2; MBD1; NR4A1; CBX2; FOXC1; THRB; ZNF33B; E2F5; BACH1; KAT2A; ZNF34; PRRX1; CBX4; UTF1; ZNF257; ZHX2; PSMC3; WNT4; TTF2; ZNF415; BNC1; ZBTB3; ZNF175; POU2AF1; ZNF43; RNF138; ZNF75D; IL16; ZNF93; SOX10; INSM1; BCL11A; FUBP1; ZNF573; DMTF1; PHIP; FOXG1; ATOH1; CAMTA2; ZNF571; ZIC1; HOXB13; LIN28A; SOX17; TFDP1; CERS4; MYBL2; CREB3; ZNF768; PAX9; DLX5; PAX6; ZNF205; KDM5C; TLE2; KLF13; PRDM2; WDR77; TOX3; MLLT10; KLF9; SPIB; SMAD4; MECP2; CIZ1; TOX4; ASCL1; SUPT3H; SSBP3; MED14; ZNF304; ZKSCAN1; RAX; HOXD1; GMNN; YAP1; NFE2L2; ZNF770; ZNF180; SUPT6H; KAT2B; NR5A2; NR4A2; ZNF253; TGFB1; JAK2; ZNF112; GLI2; SOX9; TCF7L1; ZNF124; ZNF12; USP22; FOS; ELF5; TDRD3; HIPK1; ZBED2; ILF2; HLX; ZNF235; ZNF432; ZNF131; CCNH; PLAG1; JUNB; CHD9; ZNF512B; ZNF273; TFAP2C; KLF4; SIX3; TOX; NR2F6; ZNF528; MED17; EPAS1; CDK2; BACH2; ZNF83; HLF; VDR; PRDM1; ACTL6A; HIC2; BCL6; FOXA1; RXRA; IFI16; PBX1; TAF9; ZBTB16; FOXF1; FOXA2; RBBP8; ZNF586; EGR2; ID1; TERF2; MXI1; VPS72; SSBP2; TBX3; TAF9B; BHLHE41; SOHLH2; STAT1; ZNF394; ATF3; TRIM29; OSR2