Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID76965 Tretinoin GSE92742 NKDBA Human 24h 13.3333uM EID0442
Types Number Response transcription factors
Up-regulation 289 NFKB2; PUF60; TBP; NFKBIA; EDF1; TRIM32; NONO; DRAP1; BRD8; NUP62; FHL2; TRIM28; MMS19; BHLHE40; KAT5; ELK1; ELK3; ZMYM2; ZNF212; RBM14; SNW1; NCOA4; RUVBL2; PAX8; XBP1; HLTF; PCGF2; MED1; HOXC6; SMAD2; PMF1; ENO1; RNF4; BCLAF1; EZH2; WHSC1; FOXD1; MYCBP; RFC1; SMAD3; DNAJC1; ASXL1; SETD3; MAGED1; PSPC1; KDM2A; KDM5D; ING3; MLX; PATZ1; NFYC; JARID2; USF2; SCAND1; DNMT3B; NCOR2; SOX4; ABL1; CENPF; MEOX1; RBBP5; HMG20B; TAF1D; ALX1; NR2F2; CNOT2; BATF3; PTTG1; CHAF1B; RHOA; SUV39H1; HMG20A; CREG1; SMARCA4; NFE2L1; TAF10; NRF1; TBL1X; IKBKAP; KAT7; FOXJ3; ZMIZ2; NAB1; ORC2; KDM5A; SNIP1; TBL1XR1; PHF8; ZBTB20; BRD3; ZFHX4; HSF2; ZNF292; LPIN2; TCEB2; BRPF1; YBX1; HOXA7; IRX5; ECD; CASZ1; HOXD10; ZNF652; RBPMS; GTF3A; NPAT; RNF111; SFMBT1; HOXD9; RBBP4; NEDD8; AFF1; TGFB1I1; ZNF721; BRF2; KLF1; MSL3; ZNF148; MAZ; SMARCE1; MYC; PIR; NCOA6; ZFP64; UIMC1; MED4; RBPJ; NFAT5; HOXD3; ZMYND8; ZNF408; YWHAB; PIAS3; CTR9; TBPL1; ATF4; NELFB; KLF12; PHF20; MED24; TEAD1; ZNF23; HNRNPD; BRCA1; PDLIM1; CDK8; ZNF672; CRY1; FOSL1; MSC; ZNF217; DPF2; TRIP6; BIRC2; ERCC2; SREBF1; POU2F1; MAF; ING2; SND1; ELF3; NFRKB; SP110; PIAS1; TSG101; RBBP7; PPARG; YBX3; REST; ZNF587; TRIP4; SP100; PIAS2; MEOX2; VGLL4; FOXO4; BRD2; ARID4B; MED23; CENPB; MED16; ARID4A; DDX17; LOXL2; ZNF184; RAN; TRIM27; TRIM16; ERCC3; HDAC6; ZNF384; GABPB1; TSC22D2; TLE1; RNF10; ELF1; TCF12; FOXO3; PBRM1; TLE4; HOXB7; BMI1; SETD2; ZNF248; SETDB1; MGA; BASP1; UBE2I; AATF; TCERG1; ZNF226; TADA3; SP3; PEX2; HMGXB3; CCNA2; KAT8; ZNF160; HMGB3; RERE; DDX54; HDAC1; HSBP1; SAP30; ZNF410; MAFG; TSC22D1; ZBTB18; BBX; HDGF; ETV4; MSX1; CREB3L1; RXRB; SMARCA5; BCL3; E2F6; MXD4; GTF2IRD1; DR1; COPS2; CARM1; BCL10; ZNF580; DDX5; KMT2A; TP53; HTATIP2; MEIS1; FLNA; CREB5; SIX2; AIP; CARHSP1; SERTAD2; PSMD9; RYBP; RLF; WWC1; EMX2; SALL1; SOX12; SMAD1; SMARCD3; PCGF1; BAZ1A; NFKB1; ZNF302; BAZ2B; HMGXB4; SAP18; PA2G4; CITED2; SATB2; SFPQ; ZNF593; ERBB2; BTG1; NPM1; HOXA5; ITGB3BP; CTNNB1; ZBTB38; PFDN5; SUB1; TSC22D3; MAFB; WWTR1; WT1
Down-regulation 298 MEIS2; TRIB3; CREBL2; IRF6; DACH1; TAF5L; ZNF331; ARL2BP; TFAP2A; IRF9; NR1H2; PRDM14; PEG3; ERBB4; CBFA2T3; ZNF665; CREM; NFATC4; GATA6; RAD21; FOXF2; EHF; ZNF195; LHX3; SRY; TP63; E2F4; ZNF232; CSDC2; ELK4; SALL2; GRHL2; ZNF816; AEBP1; TDP2; SPDEF; ZNF117; CDIP1; ZNF225; ACTL6B; ZNF223; ZSCAN18; MED21; FOXH1; EMX1; TCF21; VENTX; SNAPC4; HIPK2; ZNF74; TCF3; TRPS1; KDM5C; VGLL1; FOXG1; CHD2; ETS1; DLX5; KLF3; ZNF140; NFYB; SKIL; OLIG2; SRF; CDK9; TP73; SOX3; ZNF91; ZNF654; TAF1C; FEZF2; GBX1; ZXDC; SNAI2; ZNF343; CAPN15; HIRA; BRWD1; SOX2; PRDM2; ZIC3; KAT6B; ZNF557; CAMTA2; CBX4; SUMO1; E2F5; SOX15; BARX1; BCL11B; CEBPD; ZNF701; JUP; SIX6; CUX2; ZNF180; SPEN; ARID5B; ZFP69B; VDR; SUPT3H; ZNF239; NANOG; ST18; BNC2; CIITA; ZNF75D; TLX3; ZNF556; SKI; IFI16; THRB; ZNF350; TULP2; THRA; TERF1; PHIP; IRF8; MYBL1; ZNF550; PRRX1; ZNF415; HIC2; ZMYND11; TOX; ZNF141; CREB3; ZNF667; TBX21; TCEA1; MBD1; TFDP1; ZNF589; NR4A3; NR2F1; SUPT7L; SHOX2; CREB1; ZNF345; MYRF; RARG; SOX17; ZNF354A; PRDM12; ZNF614; ZNF571; MED14; ZNF623; SPIB; TRIM22; HDAC9; ZKSCAN1; RNF138; CNOT3; SIN3B; ID4; ZNF432; SOX13; ZNF268; TTF2; TAF4B; NFYA; MYBL2; NFATC3; LIN28A; THAP10; VAX2; TULP3; EN1; PBX3; ZNF273; BCL11A; ZNF85; CBX7; PAWR; TFCP2; BNC1; ASCL1; TBX1; ZNF770; ZFPM2; PITX1; PSMC3; MECP2; CCNH; GTF2I; ZNF257; ZNF512B; ACTL6A; NAB2; TOX3; TLE2; ID3; ZBED2; DMTF1; TGFB1; NFE2L3; FUBP1; ZNF124; ZNF682; TERF2; FLI1; WDR77; ZNF253; SUPT6H; ILF2; KLF13; ZFHX3; TAF9B; TCEA2; GMNN; NR4A1; ZNF43; ARID3B; FOXE1; NCOA3; ZHX2; MYT1L; SSBP2; JAK2; SSBP3; ZFX; ZNF528; AFF4; MYCL; NFE2L2; ZNF175; EGR3; FOXA2; TAF1A; INSM1; HOXB13; JUNB; FOS; HEY1; FOXC1; ZEB1; CTBP2; CDK2; NR2F6; TDRD3; HLX; KLF9; PRDM1; KMT5A; ZNF112; CD3D; BACH1; TAF9; TOPORS; PAX5; PAX6; ZNF529; ZNF93; DLX2; VPS72; POU2AF1; PIAS4; ZBED1; TOB1; HOXA10; TCF7L2; ZNF177; PLAG1; IRF4; NR0B1; HBP1; ZNF107; ZNF423; CEBPG; ZNF131; SOHLH2; ZNF430; PBX1; NR4A2; PBXIP1; TXNIP; RRN3; ZNF165; KLF4; ZNF586; TFAP2C; RBBP8; ZIC1; HIPK1; STAT1; ELF5; ZNF394; MAFF; GLI2; EPAS1; ID1; MXI1; TCF4; BHLHE41; HHEX; EGR2; SOX9