Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID76964	Tretinoin	GSE92742	NKDBA	Human	24h	40uM	EID0442

Response Information :

Types	Number	Response transcription factors
Up-regulation	175	PUF60; EDF1; BHLHE40; NFKBIA; NONO; DRAP1; RFC1; SETD3; PAX8; TBP; RNF4; SNW1; ZNF212; BRD8; ZMYM2; CREG1; MMS19; ATF4; SOX4; SCAND1; WHSC1; TCEB2; ZNF516; ZBTB20; TRIM32; KAT5; BANP; NRBF2; ALX1; ABL1; DNAJC1; ENO1; HMG20B; NCOR2; PMF1; ZFHX4; KDM5A; NFRKB; KDM4A; ZMYND8; PCGF2; HLTF; HOXD10; RBPJ; RBM39; NKX2-2; ZNF652; MAGED1; NCOA4; NFYC; ASXL1; TRIM28; NFE2L1; MYCBP; RFXANK; MXD4; TRIM16; UIMC1; MAFG; ELK1; ELF3; DR1; ZNF133; FOXD1; HOXD9; SP110; CREB3L1; SMARCE1; ZNF292; HOXD3; PHF20; CNOT2; RCOR1; AFF1; KDM5D; YBX1; NCOA6; TBL1XR1; ZNF148; ZNF721; HDAC3; CTBP1; MEIS1; PDLIM1; TGFB1I1; LOXL2; TBL1X; PQBP1; PSPC1; KMT2A; ZNF408; SETDB1; BRD3; ZNF446; PIAS3; ZNF611; MYT1; DNMT3B; MGA; SOX12; SMAD2; WWC1; NELFB; AIP; WT1; TCERG1; TCF12; VGLL4; MDFI; GTF3A; ZNF32; MED16; CARHSP1; ZNF160; JARID2; NEDD8; RLF; PIR; RFX5; CREB5; HMGXB3; RHOA; CTR9; PEX2; BASP1; TLE1; PRPF6; PCGF3; SIX2; SMARCA4; NR2F2; ZNF410; HSBP1; SOX11; PIAS1; TAF10; RNF10; HTATIP2; SND1; ERBB2; VEZF1; MAZ; PFDN5; NR0B1; DDX17; FOXN3; YWHAB; HOXA5; TAF11; GTF2IRD1; FOXO3; BCL6; HOXB7; JUND; HDAC1; FOXJ3; EYA1; AR; TBPL1; MXI1; BAZ1A; TP53; CDYL; SMAD3; PHF1; BTG1; KLF6; EMX2; TSC22D3; MAFB; DAXX; MAF; TSC22D1; MECOM; PLAGL1
Down-regulation	216	RAD21; CREBL2; EHF; IRF6; ARL2BP; CBFA2T3; EGR3; CALR; ERBB4; VGLL1; TAF5L; TRPS1; MED21; ZNF331; TAF1C; THRA; CBX7; ACTL6B; NFYB; PRDM2; FOXF2; SOX15; IRF9; SNAPC4; TRIM22; PEG3; TFAM; RNF138; FHL2; NFATC4; TCF3; ZSCAN18; EYA2; FOXC1; MYT1L; LHX3; FOXG1; WWP1; MEIS2; E2F4; ELK4; FOXH1; KLF3; PSIP1; USP22; TP63; CNOT3; VDR; E2F5; HIC2; ZNF665; TOX3; SKI; TERF2; DLX5; BRWD1; EMX1; TCF21; ZNF557; GATA6; NRIP1; THAP10; RNF6; UBP1; MDM2; SUPT7L; ARID1A; RARG; CDK9; TBX21; SPDEF; SMAD6; SOX17; FUBP1; ZKSCAN1; ZNF350; ZNF443; ID4; MYBBP1A; NFE2L2; HIPK2; TOX; RBL2; TLX3; SMAD7; JUP; TAF9; AEBP1; ZNF180; FOS; ZBED2; JUNB; MEF2A; NAB2; DACH1; TAF4B; MECP2; HMGB2; GRHL2; CAPN15; NR1H2; PSMC3; MBD2; CDIP1; ZNF124; CAMTA2; SOX13; ACTL6A; ZNF175; CREB1; NLK; KLF9; KDM5C; HDAC9; TLE2; ZNF415; ID3; SSBP3; ASCL1; MYBL2; AHR; TFCP2; CBX4; JAK2; TOX4; ST18; ELF5; ZNF195; HIPK1; SMAD1; SPI1; IRF8; ZNF432; TGFB1; ZNF623; MKL2; MYB; TERF1; PHIP; TTF2; BARX1; KLF10; ILF2; FOXJ2; CCNH; PAX5; HMGB1; MYRF; EN1; SMAD4; SOX2; RRN3; ZNF528; ISL1; ETS1; DLX2; ZNF91; PAWR; SSBP2; PRRX1; PITX1; HOXB13; MLXIP; SPIB; SIAH2; ZBTB16; ZNF33B; MYBL1; NR2F1; ZNF112; NR4A1; SOX10; BCL11A; POU2AF1; NR2E1; PRMT2; HEY1; ZNF304; TDRD3; HOXA10; KLF13; BACH1; ZNF177; NR4A2; TOPORS; ZIC1; ZNF107; CDK2; IRF2; GTF2I; ZHX2; PLAG1; ITGB3BP; SHOX2; KLF4; NANOG; POU4F1; CREB3L2; STAT1; RBBP8; HHEX; FOXF1; NR1H3; FOXA2; TULP4; REPIN1; EPAS1; DMTF1; TAF9B; INSM1; VPS72; SOX9; CITED2; NFATC3; MYCL; EGR2