Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID74149 Vorinostat GSE92742 HA1E Human 24h 2.5uM EID0425
Types Number Response transcription factors
Up-regulation 150 ASCL1; OSR2; HOXA5; FLI1; TAF10; IRF3; TCEB2; ZNF23; CITED2; MTF2; NHLH2; ZNF354A; PSMD9; NFE2; RCOR1; IRX5; HDAC2; RBPJ; ADRB2; IKZF3; MXI1; SSRP1; NCOA3; PLAG1; NRBF2; RLF; SND1; ATF3; MYCBP; BTG1; CIR1; ARNTL; DAXX; RNF10; ZBTB25; ZFHX4; HOXC10; CTR9; E2F8; LPIN2; ZNF667; PREB; ARID4A; ZNF516; UBE2B; PHF20; POU4F2; HDAC3; SOX4; HDAC5; MBD2; UIMC1; MDM4; HSF2; CXXC1; NR5A2; BRD8; SERTAD2; COPS5; TERF1; CHD1; SMAD3; TCEA2; TCF7L1; NEDD8; ETS1; IL16; SP110; CHD7; BACH2; DBP; KLF12; DNMT3B; TLE1; SOHLH2; L3MBTL1; HDAC1; NCOA2; SIX1; ZBTB11; URI1; PTTG1; HIPK3; PSPC1; BTF3; CERS6; ATF4; MTDH; CREG1; MNAT1; BCL11B; PRKDC; RUVBL2; AFF1; HOXA1; TSC22D2; CEBPA; FOXO1; SETD2; KDM5A; TRIM24; RUNX1; SETD3; ESR1; HIPK1; TOB1; ZFP36L2; ING2; RARA; TBPL1; TAF12; POU4F1; ZNF165; FHL2; FOXD1; DRAP1; WWC1; BASP1; TCF12; HEY2; CUX2; NCOA1; CRY1; JUND; ZIC1; PDLIM1; TRIM16; ZNF217; PIAS2; FOXJ3; HOXC6; TAL1; TSC22D1; NFE2L2; NCOA6; ZBTB18; CEBPB; PURA; SALL2; SOX11; MSX1; MYBL1; SPEN; GABPB1; MNDA; NRIP1; RBBP4; BCL3; NFIL3; TBP
Down-regulation 141 NFKBIA; UBE3A; PMF1; ETV4; ZBED1; ZNF266; IRX4; TGFB1I1; CDC5L; RRN3; TP63; FOXM1; MED16; ABL1; TULP3; THAP4; SUV39H1; HOXA3; ZNF506; DNMT1; PIAS4; ILF2; ZMYND11; ZBED4; ZBTB20; RARB; ZBTB16; ZNF282; ARL2BP; ZKSCAN7; EWSR1; PCGF3; ZNF562; NFIC; FOXO3; CTBP2; MEIS2; CBFB; ACTL6A; PHF2; NPAS2; TCF25; NFKB2; JUP; NELFB; PCBD1; LHX2; XRCC6; ATF5; SMARCB1; CAPN15; ESRRG; ZNF267; TFCP2L1; MYT1L; TAF5L; USP16; CENPB; TTF2; DEK; CARM1; HMGB2; RFX5; TP53; STAT6; TEAD4; MED15; ZHX2; HLF; ETV5; THRA; PTRF; CHAF1B; ZNF91; MAFB; HMGB1; CDK9; ZBTB38; NKX3-1; KLF11; ZNF432; KAT2B; HMGA2; SMAD6; BIRC2; HIPK2; IRF6; MSC; NR1H2; APEX1; FOSL1; TLE4; NFATC4; ZFP36L1; EHF; CRYM; RBPMS; STAT4; TRIM29; CHD9; ERG; YAP1; NFKB1; ZNF512B; ZNF140; NFIB; SOX2; IRF9; ZNF43; SOX17; KLF9; ZNF12; ZNF264; CTBP1; SMAD1; TCF4; NANOG; BCL11A; DLX2; ELF5; SOX9; ELF4; FOXF1; SMAD7; ZNF85; ID4; FOXF2; TRIB3; PAX5; ZEB1; ZNF573; RAD21; ZNF423; THAP10; GMNN; XBP1; AEBP1; ZSCAN18; KLF13; TFAP2C; RELB