Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID74110 Vorinostat GSE92742 HA1E Human 24h 2.5uM EID0424
Types Number Response transcription factors
Up-regulation 200 HOXA5; FOXO4; SMAD3; HOXA10; RUVBL1; HDAC9; ZBED4; URI1; BCL10; ZNF304; SATB1; SNAI2; MED17; RAD21; SSBP2; ZNF711; JUP; ACTL6A; SMARCA1; SRY; MNT; CREM; TAF4B; TOX3; PNRC1; ZNF529; ZFPM2; ZNF419; ZNF667; HDAC4; NFYB; NHLH2; ZNF235; NFE2L2; NLK; ADRB2; THAP10; FOSB; TSC22D2; BBX; VGLL1; EED; BCL6; SMAD4; CBX7; TERF1; ENY2; AEBP1; NR5A2; TDP2; ZNF223; EYA1; DMTF1; FOXF2; ATF2; HLF; ZNF415; CALCOCO1; ZNF536; SIN3B; BACH1; ILF2; WWP1; CTNNB1; ZNF329; MED14; C1D; ZBED2; CAMTA1; TOX; HIF1A; NFATC1; HOXA1; TTF2; AHR; ZNF239; ZNF331; ZNF654; GMNN; ZSCAN18; SOX13; ETV5; HES1; SPDEF; TRIB3; IRF9; SCAND1; TOPORS; BHLHE40; ZNF281; ZNF226; KLF7; RBFOX2; TAF4; PEG3; HOXD1; ZNF665; MLXIP; ZBTB11; CBFA2T3; KLF13; SPI1; JUN; TFAM; HDAC1; GLI3; SPEN; CCNH; MLLT10; IFI16; PLAG1; SSBP3; CBX4; ZNF134; THAP1; BACH2; NFKBIB; CEBPG; HMBOX1; ZNF143; HBP1; WWTR1; TFAP2A; SHOX2; ZNF593; NR4A3; E2F2; ZNF117; TP63; ZFHX3; FOXO3; E2F5; CREB1; FOSL2; SMAD7; HEY1; CREB5; ZNF580; TBPL1; GTF2I; TCF21; YWHAB; KLF9; CREBL2; ARNT2; KLF6; TXNIP; LITAF; NR4A2; RBBP5; PAWR; ZHX2; TGFB1; HHEX; CUX2; HMGA1; MDM4; STAT4; BRWD1; JARID2; FOS; USP22; ZNF217; C1QBP; NR2F1; CEBPB; NANOG; IRF6; BCL11B; BRD2; JUND; ARID1A; TOB1; TRPS1; ERG; ETS1; GATA6; TCEA2; HIVEP2; ATF3; MAFB; BIRC2; SATB2; CRK; VDR; ZNF423; FOXF1; PAX5; DDIT3; ZIC1; LMCD1; ZEB2; LEF1; EGR2; NRIP1; KLF10; MYRF; FOXG1; SOX9; HMG20B
Down-regulation 161 PUF60; FOSL1; ATF5; TFDP1; WHSC1; TP53; CCNA2; FOXM1; HMGB3; SOX4; SUV39H1; ZNF16; NFX1; PSIP1; ZNF408; MMS19; CASZ1; ELK1; SSRP1; WNT4; RARG; CENPF; CHAF1B; BASP1; FHL2; TAL1; ESRRA; CREB3L1; PMF1; NSD1; NFKBIA; NCOR2; PIAS3; PHOX2B; NCOA6; PPRC1; PGR; FOXD1; PHF2; NCOA4; FOXL2; HOXC13; NFKB1; ESR1; ZNF133; DEAF1; BRCA2; PURA; ZNF710; ZNF516; OVOL2; AFF1; PSPC1; ZNF384; BRD8; KDM5D; HDAC3; BCLAF1; RBBP7; MAGED1; HDGF; FOXN3; ZNF672; ZFP36L2; HNRNPD; SMARCA4; ZNF426; SMARCE1; TFCP2L1; KDM5A; ZNF23; WIZ; TLE4; NFE2L1; KAT7; TRIP11; EN2; STAT6; WDHD1; PAX8; TCF4; ZNF532; TCF25; RNF10; FLNA; MSC; ZNF629; ZEB1; ZNF768; GABPB1; TFEB; HOXC6; GTF3A; KAT6A; ELF5; PATZ1; ZFP64; BTAF1; SNW1; KLF1; ZNF32; XBP1; GTF2IRD1; ZNF652; PTTG1; ID1; HOXC4; SREBF1; HOXB5; BLM; ARID3B; HOXB7; SIM2; PTRF; GFI1; NUP62; RUNX3; MED24; RREB1; LPIN2; TAF10; ID2; UBE2I; MSX1; TGFB1I1; RUNX1; NFE2; PSMD9; ARNTL2; ZNF248; TAF1D; KLF5; ERBB2; MEIS1; TULP4; HOXB6; TRIP6; HMGB1; SALL1; MED1; CITED1; EYA2; KAT6B; PITX1; IRF4; TBP; PFDN5; PBX3; ZMYM2; ING3; PCGF2; RXRA; ZBTB38; HOXC10; TBX3; SMAD1; HIRA; HMGA2; EMX2; RELB; BHLHE41