Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID74108 Vorinostat GSE92742 HA1E Human 24h 5uM EID0424
Types Number Response transcription factors
Up-regulation 209 FOXO4; HOXA5; SMAD3; HDAC9; NR5A2; TERF1; THAP10; RUVBL1; GATA2; SSBP2; SRY; ZSCAN18; JUNB; HDAC5; TDP2; CBX7; SNAI2; ATF3; ZNF331; RBFOX2; PNRC1; CREBL2; MEF2D; EPAS1; RBPMS; POU4F2; CREG1; ZNF329; TLX3; GMNN; PHF20; NANOG; HEY1; CAMTA1; AHR; SSBP3; ZNF667; URI1; CERS6; JUP; IRF9; FOSB; HES1; TTF2; ISL1; HLX; SPDEF; NLK; CITED2; ZNF415; EYA1; CBFA2T3; HLF; TOX; VGLL1; FOXF2; WWP1; ZNF529; ZNF225; TAF4B; ADRB2; ZFHX3; NR4A3; NR0B2; ZNF571; SOX13; TOB1; CUX2; CREM; HOXD1; CALCOCO1; HMGN3; BRD4; NHLH2; PIAS1; ZNF623; GATA6; TRIB3; HMBOX1; BCL11B; ZNF711; SPEN; CEBPB; SP2; ZNF223; RAD21; HOXA1; ST18; ZNF419; CBX4; TOX3; CBFA2T2; ARNT2; KDM5C; HMGA1; CNOT3; CDC5L; TOPORS; MYRF; TP63; ARID1A; ZNF394; PEG3; NR4A2; ZNF665; EZH1; DLX5; KLF13; NR4A1; RSF1; NR0B1; JUN; TFAP2A; HOXA10; HIF1A; ZNF217; MYBL1; E2F5; CCNH; ID4; MED21; JARID2; ATF2; USP22; SCAND1; ARID5B; HIC2; IRF8; ENY2; HBP1; ERBB4; ZNF304; LITAF; C1D; EN1; NFYB; KLF9; CRYM; FOXA2; RCOR1; PBX1; MYCL; SMAD6; HDAC1; ZNF281; ACTL6A; VPS72; NFYA; SALL2; SUPT7L; TGFB1; MED13; MEIS2; ARID3B; TCF7L2; STAT4; MEN1; OSR2; DDIT3; NFKBIB; MKL2; ZKSCAN1; TCF21; ZNF589; TBPL1; SOHLH2; ZBED2; LIN28A; FOXG1; SMARCA2; NKX2-2; ILF2; INSM1; FOS; SOX10; TSC22D1; BCL6; C1QBP; PSIP1; TCEA2; CALR; MTA1; NRBF2; SMAD7; ETS2; TFEC; HHEX; LMCD1; BBX; IRF6; ZBTB16; STAT1; RBBP8; MNDA; ZNF580; SOX9; KLF10; EGR2; WWTR1; ETS1; AEBP1; TLE1; CRK; GATA3; TRPS1; TFAP2C; ZIC1; THAP11; NFIL3
Down-regulation 186 FOSL1; PUF60; FHL2; WHSC1; TP53; ZFP36L1; RBM39; CCNA2; MSL3; PBRM1; SUV39H1; TADA2A; SMARCA4; CENPF; MXD3; EDF1; BASP1; FOXM1; NFKBIA; KAT5; ZNF16; SFMBT1; TFDP1; ZNF24; STAT6; HOXB7; PAX8; SMARCE1; PRDM4; NSD1; BATF3; NFE2L1; NFKB1; KDM5D; ATF5; DRAP1; ZBTB38; PURA; TAF1D; CHAF1B; PSMC3IP; SMARCC1; ZNF35; PMF1; PCBD1; KDM2A; SREBF2; ELK1; DAXX; HMGB3; PRMT2; ZNF408; PPRC1; ELK3; ZNF587; ZNF146; WNT4; FOXD1; BCLAF1; ZSCAN16; TGFB1I1; RNF10; ZNF267; NCOA6; GABPB1; EBF2; CREB3L1; DEAF1; DDX17; CASZ1; RBBP4; GTF2IRD1; KAT7; MMS19; HMGB1; HOXC6; PATZ1; HNRNPD; ESR1; TRIM27; PSPC1; MYF6; SIAH2; SOX4; SSRP1; KMT2B; RNF14; WIZ; NKX3-1; BAZ1A; TRIM32; AFF1; ZNF22; SNW1; TAL1; XBP1; ZBED1; BHLHE41; PREB; KLF1; ZFY; ORC2; SUZ12; PIAS3; ZNF302; BATF; ZBTB1; SREBF1; NR2F2; GLI2; NCOR2; ZNF292; ZNF672; BRD7; ZNF202; BTAF1; SIM2; HOXC4; ELF3; ZNF83; MED1; RREB1; ZBTB40; MAX; CRY1; TCF25; ZNF516; RUNX1; ZNF93; PTRF; REPIN1; BRD8; ZNF133; STAT5B; ZNF652; SP140L; FOXL2; MSX1; PAXBP1; EMX2; ZNF33B; CIZ1; RBBP7; TBL1X; NCOA1; PRPF6; BRPF1; NPAT; VEZF1; POU2AF1; ING3; PSMD9; ERBB2; ZFHX4; NPM1; AR; NUP62; BNC2; ELF1; CHD7; PTTG1; MEIS1; ZSCAN31; CBFB; FUBP1; MYCN; TEAD1; NFE2; MAGED1; PCGF2; POU4F1; ATF1; MGA; EYA2; ECD; RUNX3; RELB; NRIP1; TBP; TLE4; CEBPZ; ZMYM2; HOXB6; HMGA2; PBX3; MECOM