Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID74015 Trichostatin-a GSE92742 PHH Human 6h 10uM EID0412
Types Number Response transcription factors
Up-regulation 138 THAP11; SSBP3; CERS6; NFIL3; RUVBL1; FOSB; ZSCAN9; ZNF331; NR4A2; HDAC4; ID3; CBX4; ZNF432; ZKSCAN7; FOXJ1; SPIB; SOX12; ZNF268; ZNF107; SOX13; KAT6A; BCL11A; INSM1; SOX9; SCAI; ZNF671; PBXIP1; ZNF93; ZNF112; SALL2; KDM5B; POU2F1; SSBP2; PIAS3; ZNF813; HMGB2; ZNF423; HDAC9; ZNF83; NFE2L3; ZNF529; E2F5; RAD21; NR4A1; EGR3; ZNF239; ZNF573; GATAD2A; JUN; ZNF468; TRRAP; ZNF667; ZNF415; CBFA2T3; GATA2; ADNP2; HOXC4; ZNF426; ZNF551; IRF8; PRKDC; ZNF195; NR2F1; GATA6; MAZ; ZIC3; HMGA1; SOX2; CAMTA1; SIX1; HIVEP2; ZNF184; ZNF606; TCF21; NEUROD1; RBBP5; ZNF532; POU4F1; DACH1; MED24; ZBTB18; ARNT2; SOX11; HOXD3; FOXA1; EGR1; TCF7L1; ZNF611; PBX1; ZSCAN18; DLX2; FOXL2; SIAH2; CITED2; ERBB4; ZNF304; ZNF43; CUX1; SATB2; OSR2; ZNF544; PEG3; ILF2; NPAS2; EMX2; TDP2; GTF2A2; TRPS1; FOXG1; CALR; HMGB3; JUND; HMG20B; FOS; NR1H2; MNDA; HES1; ZNF586; ZNF430; KLF2; WT1; TOX3; FOXF1; NANOG; ZNF721; HOXC10; MYBL1; ZNF160; AEBP1; ARID5B; HOXC6; ZNF264; ZFPM2; LEF1; ID1; CD3D; ZIC1; MTF2
Down-regulation 109 MYC; PDLIM1; PAX8; CCNA2; KLF5; TRIM25; NFE2L1; NCOA4; PTRF; EPAS1; NUP62; KLF3; STAT5B; STAT6; YAF2; PPARG; FOXO1; NAB1; TFEB; TRIM27; PIR; SREBF1; ATF1; SETD2; UBE2I; SMAD2; PCGF3; RREB1; RNF14; PQBP1; ELF4; MAFG; HOXA1; ZNF263; SMARCA2; TGFB1I1; RNF141; NR0B1; GABPB1; ASXL1; HIPK3; RXRA; BCL6; CDYL; MDM2; PRMT2; MBD2; GTF2I; CEBPA; BATF3; ZZZ3; PMS1; TRIM32; XBP1; KAT2A; TCF12; SUV39H1; MITF; ETS2; ZNF148; TRIM22; DPF2; NFE2; STAT1; NCOA2; MEF2A; HDAC6; TCEB2; BAZ1A; BHLHE40; PURA; SOX4; ZBTB38; NPM1; STAT3; BATF; TRIM29; MKL2; ZFHX4; ELK3; ZNF131; NR1H3; SOX10; TWIST1; TCERG1; ZFP36L2; EGR2; TP63; ZMYM2; IRF1; MAFB; LOXL2; HOXA5; TRIP6; NFKB1; MECOM; FLNA; ETS1; SNAI2; ZFP36L1; NR1D2; PPARD; AHR; MSX1; HHEX; HOXB7; CEBPD; ABL1; CRK