Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID73937	Trichostatin-a	GSE92742	PHH	Human	6h	10uM	EID0411

Response Information :

Types	Number	Response transcription factors
Up-regulation	123	CNOT3; ZFP30; OVOL2; THAP7; NR4A1; ZNF646; ELF4; KDM5C; ZBTB16; CBX4; ZNF768; BCL3; SMAD7; TGFB1; SKI; SSBP3; SPI1; CIC; MYCBP; ZNF557; VGLL4; KLF13; TCF21; BARX1; ZNF688; ZNF212; HSF1; SMARCB1; ZNF671; MEF2D; TCF15; ING4; SUMO1; MYBL1; SRCAP; ID3; TDP2; HDAC7; TFCP2L1; TEAD3; KAT6A; MKL2; TLE2; TULP3; GRHL2; JUP; BRD4; CDX1; HLX; CALR; ZNF354A; MECOM; THAP4; MYT1; SIRT2; IRF6; PIAS3; SP110; MAZ; CENPB; CBFA2T3; SOX11; FOXF2; SPIB; ETS2; POLR3C; RRN3; TSC22D4; VDR; TCEB2; EHF; ATF3; SNAI2; TGFB1I1; BCL10; KLF11; HMGA1; CREB3; NR3C2; INSR; KDM5B; TCF7L1; NEUROD1; PHF20; KLF5; MED15; TCFL5; HOXB5; NR4A2; MBD2; ELK3; JUNB; ARID1A; MTF2; ELF3; NR1H2; BCL6; HOXB6; DRAP1; MYCL; LITAF; VPS72; STAT3; TXNIP; ZNF91; FOXF1; ID1; BTG1; RAD21; BRCA1; ZNF117; ZSCAN18; HOXC10; NFIB; MEIS2; FOXO4; HOXB7; TCF4; GATA6; CREB1; HOXA5; ARNT2; ERBB2
Down-regulation	156	CCNA2; XBP1; APEX1; TGIF2; SAP30; EGR2; DNMT3B; MAF; LIMD1; DEAF1; GABPB1; NCOA2; NONO; ZNF516; YBX3; DDX17; ARNTL2; CCDC59; NFE2L1; STAT5A; CREB3L1; TP53; SMARCA2; NCOR2; HCFC1; TCERG1; PRPF6; NR2C1; ENO1; ZSCAN31; TDRD3; DDX5; GCFC2; ZZZ3; SETD2; JAK2; MED23; SMARCA1; NCOA4; BHLHE41; ATF4; NPM1; RREB1; HLF; JUND; CSDE1; KLF6; PRMT2; POU4F1; PAX8; BNC2; C1QBP; TGIF1; ZBTB1; TTF2; IRF4; EWSR1; MYRF; ZFHX4; ZNF83; KAT6B; NPAS2; REST; HIF1A; PLAGL1; CDYL; ABL1; YAP1; UIMC1; NFKB1; ZHX2; ZNF652; RBM39; BAZ1A; ZMYM2; RERE; BHLHE40; AR; COPS2; HIPK1; GATA4; PATZ1; SMARCC1; EMX2; KDM2A; ECD; TRIM22; STAT1; CTR9; CNOT1; BMI1; PPARG; SIX1; AHR; NCOA1; CEBPA; URI1; ZNF189; EGR3; ELF1; PIR; MAGED1; ITGB3BP; TBX3; AFF1; NFYA; FHL2; BCLAF1; HMGN3; SOX4; FOXA1; NRIP1; SMAD3; TCF12; ZNF217; TRIM16; NUP62; TSC22D2; IRF9; RB1; EDF1; RFX5; MSX1; ZBTB38; TRIP6; PMS1; HNRNPD; IRF7; LIN28A; MYC; FOXJ3; ETV5; ZBTB11; KDM5D; KLF4; MED1; ID2; HLTF; ZNF512B; SUB1; ESR1; HMGB2; IKBKAP; ETS1; ARID5B; ZNF131; MTA1; PBX3; BASP1; CITED2; ZNF589; HOXB2; MEIS1; PEG3; TOX3; JARID2