Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID73784	Trichostatin-a	GSE92742	PHH	Human	24h	10uM	EID0409

Response Information :

Types	Number	Response transcription factors
Up-regulation	148	EGR1; RUVBL1; SIX1; SETD3; HDAC1; RCOR1; ECD; HLTF; AFF1; KLF12; DRAP1; NELFB; EDF1; PHF20; RNF141; GTF2A2; TSC22D4; DBP; BRD3; FOXJ3; PPARG; CTR9; SREBF2; SAFB2; RUVBL2; KLF2; MED27; SND1; NEDD8; RHOA; DYRK1B; YWHAB; TRIM32; BAZ1B; HMG20B; ID2; MSX1; BRPF1; CBX7; BCL3; TRRAP; NFIB; NRBF2; MEF2D; SIN3B; TRIP4; ARID4A; SMARCD2; PIAS2; YBX2; NFIL3; MLX; PBXIP1; BRD8; CITED2; USF2; PHF8; RUNX3; CREM; EGR3; NR2E1; WWTR1; PSMC3IP; ZMIZ2; NLK; STAT1; MAGED1; SMARCA1; HOXC10; ING1; ZNF45; NUP62; ATF7IP; BCOR; HIVEP2; KDM5A; GATAD2A; UBE2L3; EP300; NFIC; ING2; ZNF324; RERE; JUNB; NR3C2; FOXD1; MNT; NFX1; BMI1; FOSB; ETS2; LHX6; SIX2; JUN; MED24; SMAD1; ZNF131; JARID2; JUP; CENPB; TRIM28; STAT3; NR4A1; CHD3; BBX; ERG; KDM5D; MAZ; CALR; MXD4; FOXC1; TGFB1; SP110; IRF3; ADRB2; HOXC6; RBPJ; IRF2; AES; FLNA; CREB3L2; NCOR2; FOXG1; KLF7; HES1; IKZF1; ARID5B; GATA6; PPARD; SAP30; KLF9; PAX5; ARID4B; SAP18; MTA1; SMAD2; EYA2; SMAD7; IRF7; NR2F1; BHLHE40; BASP1; ABL1; LEF1; PARP1; MTF2; PITX1; KAT6B
Down-regulation	167	ATF5; CCNA2; TRIB3; RARB; ZNF219; FOXM1; ZFPM2; PRRX1; ARL2BP; PDLIM1; ZHX2; HOXB9; VPS72; SETDB1; RAD21; AEBP1; HOXD11; TSHZ2; HOXB5; ST18; NANOG; CTCF; POLR3C; MEF2C; ZNF345; XBP1; PFDN5; KLF3; TULP3; ZNF33B; ZNF665; RARG; PEX2; E2F4; ZFP36L2; TTF2; BACH1; BTF3; IRX4; PSMC3; ARNT2; ZNF195; MYC; PBX3; DDX17; ZNF12; ZBTB20; ZNF215; MED13; AHR; TFEC; TCEA1; NCOA2; ZNF239; CEBPG; ZNF44; HDGF; SP140L; E2F3; MYBL2; NR1H4; HOXB6; CDX1; DDX5; TFAP2C; RBM39; SNAI2; YBX3; ZIC3; SUZ12; YEATS4; SOX5; ZNF652; PROX1; TAF9; ZNF136; CNOT2; MYRF; ZNF721; ZNF32; HSF1; SALL2; SIX3; ID4; CNOT6; SP3; MYT1; TP53; HMGB1; IRF6; KAT2B; NFAT5; HOXB2; ZNF266; BHLHE41; ZBED2; SOX4; SOX17; OLIG2; ZNF91; NR2C1; ZNF117; ELF1; HMGB2; ZNF264; NHLH2; LOXL2; CTNNB1; SP100; TFAM; GTF3A; HOXB7; ZFHX4; PAX8; ILF2; FOXE1; SUPT3H; ZNF544; ZNF124; BNC2; IRF9; FLI1; NPAS2; ERBB4; ZSCAN31; TBL1XR1; RREB1; NR1D2; ZNF22; CTBP2; PHIP; FOXA2; MYB; ZEB1; TAL1; ZEB2; TDP2; LIN28A; TGIF2; TRIM29; FUBP1; FOXN3; IFI16; TRPS1; STAT6; CUX2; ZBTB38; TP63; ZNF43; ESR1; WT1; HLF; ZNF83; EYA1; HHEX; TRIM22; PBX1; ETS1; ZNF551; RUNX1; KLF4; NR0B1; NR2F6; PIR; NRIP1; ERBB2; ZNF586