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Overview Perturbagen Expression Profiles Transcriptional Responses
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Overview Perturbagen Expression Profiles Transcriptional Responses
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Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID72547 Trichostatin-a GSE92742 SKB Human 24h 10uM EID0390
Types Number Response transcription factors
Up-regulation 108 NEDD8; ADRB2; RUVBL2; ITGB3BP; CEBPA; RHOA; CRYM; SNAI1; DBP; STAT3; CREB3L2; SND1; HLTF; CTR9; PBXIP1; MYCBP; HABP4; ZNF468; GTF2A2; CERS6; ECD; TRPS1; ZBTB44; HDAC3; TAF4B; NKRF; NFIL3; LITAF; SMARCD3; CBX7; ACTL6A; IRF8; PRKDC; IKBKAP; SOX4; NR3C2; NLK; RBBP8; SIX1; NCOA3; C1QBP; FOXC1; TLE1; ARNTL; NOC2L; MYT1L; CREG1; PSIP1; ZNF415; PITX1; ZNF239; HLF; ETV1; CCNC; ZNF226; PMS1; TCFL5; HDAC1; GLI1; ZSCAN18; SNIP1; TAF6; MEN1; RUVBL1; EZH2; ZNF331; PIAS2; NFRKB; ATF2; EED; SOX10; DLX5; SSX1; SALL2; SPIB; DNMT3B; RERE; TBX3; WWC1; TLE2; CBX6; ATF3; HMG20B; SREBF1; JARID2; IRX5; BLM; FOXJ3; KLF9; CRK; TRIM32; SMARCA1; BCL6; TOB1; FOXF1; SMAD3; LEF1; CRY1; SMAD7; C1D; DNMT1; PEG3; BIRC2; SATB2; TCEA2; STAT1; CALR; DLX2
Down-regulation 176 YBX3; ZHX2; THAP11; TP53; ATF5; VGLL4; IFI16; SOX17; ELF4; FLNA; ZEB1; ZNF302; CEBPG; KLF4; FHL2; CSDE1; ARL2BP; ZNF688; TBX2; FOSL1; CTCF; ZNF652; PHF2; ZNF264; BTF3; RFX7; ZNF222; TEAD4; SMARCC1; ZNF551; WHSC1; PTRF; HOXB7; ZNF124; NFE2L2; MYCN; TFDP1; ZNF219; FOXE1; EMX2; BAZ2B; CENPB; ZNF770; FOXM1; TGIF2; ADNP; SMAD1; ZNF764; ZFP36L1; SOX18; ZNF84; FOXO3; MEIS2; ESR1; HOXD3; NCOA2; AEBP1; SUPT3H; RBM39; ZNF227; SRF; SOX3; MSC; PQBP1; GFI1; PRDM13; HOXB6; SNAI2; HDGF; ELF1; BRD7; TULP3; LMCD1; NONO; TAF9B; KAT6A; ZBTB14; NFE2L1; PATZ1; ZNF136; HMGB1; ZNF140; ZNF134; SP140L; ZFP36L2; ZKSCAN8; ZBTB1; CARHSP1; ZFP64; ZNF512B; PCBD1; ZNF12; GTF3A; CEBPD; ZFY; PRPF6; ZNF93; TDRD3; GABPB1; ZNF32; SMARCB1; ZNF426; AGO2; STAT5A; OSR2; HLX; NAB1; TCF12; BNC2; MEF2C; ZNF91; NEUROD1; HMGN3; ZNF580; SOX13; NCOA4; KMT2B; HOXB5; KLF11; ZEB2; DDX5; CTNNB1; ZFPM2; MBD2; HNRNPD; ZSCAN31; PHIP; MAFB; ZBED1; MED6; ID4; PRRX1; ZMIZ1; SUV39H1; DDX17; GATA6; TGFB1I1; RBPJ; TRIM29; SP3; LIN28A; COPS2; HMGB3; HDAC4; TFAP2A; HOXA10; MTA1; ZNF423; PIR; HMGA2; TXNIP; NFKB1; WT1; MYRF; MAF; CBFB; EHF; NKX2-2; ELF5; PCGF2; ID1; MTDH; ZBTB16; XBP1; ARNT2; HIRA; CUX2; ERG; HOXC6; ATF4; TOX3; BHLHE41; TRIB3; ERBB2; PSMC3; ASCL1
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