Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID71897 Chloroquine GSE92742 PHH Human 24h 10uM EID0388
Types Number Response transcription factors
Up-regulation 151 PPARG; DPF2; CCDC59; WWP1; RELA; SIAH2; MDM2; CREBZF; MNX1; SMARCE1; NR2C1; PBRM1; UBE2I; POU2F1; LIMD1; RRN3; ETS2; GRHL2; HOXB7; CRY1; REPIN1; CNOT6; ZMYND8; KLF10; HCFC2; ZNF3; ZNF23; KMT2A; RBBP5; TCF7; EP400; IL16; TOX4; YAF2; TRIM25; ZNF143; PIR; ZNF124; KAT5; NKX2-2; TBL1X; OSR2; MDM4; MAFB; RBBP7; MAFG; PIAS1; BAZ2A; CARHSP1; GCM1; KLF3; EZH1; WHSC1; IRF7; RBM14; MED1; MXD4; BASP1; LHX6; SFMBT1; STAT2; CSDE1; ZNF711; UBE3A; NR1I2; SFPQ; CBFA2T3; EGR4; NFKBIA; MSX1; KLF2; ZNF160; FOXJ3; ZNF263; MEN1; RNF10; MED12; NAB1; KDM2A; TSC22D3; BCL11B; IRF1; LPIN2; YWHAB; KDM5D; EWSR1; RBPJ; DNMT3B; CTBP1; TRIM16; CUX1; E2F3; AEBP1; TXNIP; FOXO3; NFATC1; EZH2; TSC22D2; ZNF589; ID2; CREG1; BTG1; ZNF165; HMBOX1; PAWR; ADNP2; NCOA3; CREB3L1; CTR9; RUNX1; DNAJC1; ERG; ZBTB20; TFDP2; CARM1; YBX1; ENO1; HEY1; KLF6; SALL1; DRAP1; SAP18; ARNTL; RLF; PQBP1; JAK2; USP16; KLF4; ATF4; SMARCC2; LITAF; SP2; IRF8; ZIC1; ERBB2; NFAT5; EGR2; ZNF117; HOXA5; PDLIM1; NCOA2; CRK; TRIP6; IRF4; EGR3; DMTF1; RUNX3; DAXX; HTATIP2; POU2AF1; SCAND1
Down-regulation 145 LOXL2; MEIS2; ZNF7; MEIS1; RBFOX2; HDAC9; ZBED2; ZNF536; HOXB2; ZNF133; TLE4; PHOX2B; HOXB6; STAT3; LZTR1; ZNF473; PBX1; SIM2; HIPK2; JUND; ESRRG; PFDN5; HES1; IRF3; BNC2; TERF2; PMS1; ZNF573; HDAC5; GLI2; PRRX2; ZNF35; KDM4C; TBX3; VDR; CHD9; ZNF654; NFIX; HSF1; EYA1; ZFHX4; TCF25; CALR; ZNF112; BRD7; SIX2; ARID5B; NCOR1; ZNF710; SMARCD3; ZNF667; ZNF227; TRIP11; SRCAP; BRD3; SIX3; CEBPD; MED15; NFE2; TFAP2C; EHF; DLX2; AFF1; BAZ2B; ZNF93; CREB3L2; PCGF1; ZSCAN9; RYBP; E2F5; TRIM24; ID1; HHEX; CENPB; LIN28A; TCF3; TCEA1; ZNF217; ZMIZ1; PSIP1; RBBP8; HDAC7; PKNOX2; KDM5C; SOX9; FOXK2; IRF6; CCNE1; ZNF623; TULP4; IFI16; ST18; DACH1; CBFB; HLTF; TCF4; ZNF544; MNAT1; NFIB; GATA6; SIX1; ZNF415; PEG3; SND1; ABL1; ZNF239; ZNF331; PBX3; BCL11A; RBPMS; ZNF232; TP63; NR2F1; ETV5; ZNF131; ID3; NANOG; KAT6B; COPS5; SSBP2; SPEN; BHLHE41; ZNF580; NFATC4; STAT1; TEAD4; PTRF; CREM; CTBP2; TCF7L1; ZNF423; MYBL2; CHD7; PITX1; MYCN; JUN; HMG20B; TCFL5; TWIST1; VPS72; ZBTB18; PLAGL1; PAX6; ZEB2; TRPS1