Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID71613 Menadione GSE92742 NPC Human 24h 10uM EID0386
Types Number Response transcription factors
Up-regulation 129 CEBPA; BHLHE41; CEBPD; MXI1; ID2; CEBPG; FOXC1; SSBP2; CALCOCO1; DDIT3; RELB; ATF6; BCL11A; HINFP; MAZ; PCGF1; PHF1; MED15; BRD2; TP53; ZNF93; ZNF148; CREB5; VPS72; MED13; ZFP36L2; ZNF593; SIRT7; AGO2; EMX2; BANP; ZNF350; ETV6; SATB2; NR3C2; KLF9; ZNF12; HIVEP2; HMBOX1; NPAS2; SOHLH2; JUNB; HOXC10; CBX6; TSC22D3; TRIM29; ARID5B; CTBP2; ZHX2; BRD4; WT1; OSR2; CEBPB; NR1D2; ZNF623; PPARGC1A; HES1; PURA; NR4A3; ZZZ3; ZNF430; TBX3; HMGA2; HDAC9; MED17; ATF4; TSC22D4; ERBB4; LITAF; RREB1; ZNF91; BCL3; MYC; ZNF266; ZNF573; CDYL; CITED1; CBX7; E2F8; ID1; INSM1; LYL1; CIZ1; FOSL2; ZNF43; TTF2; KLF6; ELF4; FOXG1; SMAD6; JUP; ZKSCAN1; BAZ2A; SNAI2; TAF1; ZNF589; ZNF331; ZBTB7A; PPP1R13L; HTATIP2; ACTL6A; ZNF44; TOB1; ATF5; ATF3; GATA2; MYBL1; MNDA; HMGA1; MAFF; TOX3; ZEB1; TXNIP; MITF; NFATC3; HOXD1; NFATC4; PHF20; ZNF665; TCF7L2; TGFB1; KLF4; SOX9; TRIM16; SMAD3; MYCL; GATA6; NFKB2; CRK
Down-regulation 152 CCNA2; EZH2; NFIL3; USP22; PARP1; PSIP1; TFDP1; SOX11; HMGB2; HIF1A; SUV39H1; SMARCC1; CBFB; SMARCA5; SUB1; PHF2; CENPF; TCF12; PTTG1; CHAF1B; TCF4; HNRNPD; SAP30; ETS2; ATF1; ZBED1; HLX; FOXN3; ELF1; ZBTB1; SOX2; IRF8; ILF2; HDAC2; PCBD1; GTF2A2; RERE; EGR2; CCNC; XRCC6; RNF138; HMGN3; SMARCE1; TCERG1; GLI2; FOXO1; BMI1; CBX5; ZMIZ1; BCL11B; HMG20A; TOPORS; RBPMS; CHD9; JARID2; RBBP7; MYCN; RBBP8; ARID4B; HSF2; COPS2; ING2; WDHD1; CARHSP1; ZNF512B; BACH2; NKX3-2; SFPQ; EDF1; IKBKAP; BCLAF1; EYA1; UBP1; STAT1; ZNF267; RBM14; RCOR1; MEOX2; BRCA1; SHOX2; TCF7L1; PLAGL2; PIAS3; CTR9; ZNF532; ITGB3BP; GABPA; TLE4; FOXM1; SMAD2; ELF5; AHR; PATZ1; RFX5; CBX3; EGR3; GABPB1; CRY1; SMARCA4; TCF21; MAF; NKX2-1; ERBB2; LZTS1; TRIM22; WWTR1; RNF141; BRD3; MEIS1; NR5A2; MAGED1; FUBP1; HMGB3; ISL1; LMCD1; ADNP2; NANOG; PEG3; PAX5; RAN; NCOR2; HLTF; C1QBP; HOXC6; PDLIM1; SIAH2; PCGF2; RBBP4; MED24; NFE2L1; ETV1; TFEC; CHD7; AEBP1; TSC22D2; MDM4; CUX2; TGIF1; BASP1; DMTF1; MBD2; LEF1; TCEA2; MEIS2; HDAC6; NR2F1; PBX1; HOXA5; NUP62; MAFB; MSX1; PUF60