Transcriptional response

Response ID Perturbagen Data accession Cell Source Species Duration Concentration Expression ID
RID69491 Trichostatin-a GSE92742 PHH Human 24h 10uM EID0378
Types Number Response transcription factors
Up-regulation 323 SHOX2; ZSCAN18; CDIP1; TAF1C; TCF3; HOXC10; E4F1; THRA; ZNF217; ZNF671; TCF7L1; IRF6; VGLL1; BCL11A; NOC2L; MXI1; HOXC8; TAF5L; HOXD3; FOXC1; MED17; TLX1; PIAS4; ZNF211; PCGF3; JUN; FUBP1; TP73; ZXDC; TCFL5; EMX1; BRCA1; TLE2; CDK9; PROP1; MYBL1; HOXC4; DMTF1; MNAT1; BRD3; DBP; KLF9; E2F1; HINFP; IKZF1; CHD7; PHF1; HOXB2; GMEB2; RARA; ZNF91; ZNF200; SERTAD2; UIMC1; PBX3; ATF3; MECP2; RUVBL1; ARID1A; OVOL1; ZNF202; ZNF83; BLM; CREM; NPAT; TGIF2; PITX3; NPAS2; SETDB1; CCNH; ZNF85; LHX3; NFE2L2; ZNF500; ZNF117; TBX21; ZNF606; ERBB4; ZNF586; NCOA1; CCNE1; GLI1; HOXD1; NFIC; SSBP3; E2F4; CHD3; SETD3; SMARCC2; ZSCAN32; ZNF580; ZNF688; SNAI1; SAP130; BNC1; ELK4; HLX; HMG20B; MED15; ZNF276; ZNF205; TP63; RBL2; MYF6; HIF3A; HOXB1; TERF2; NEUROD2; CDK2; OLIG2; ZNF415; SRCAP; SNAPC4; PMS1; IRF5; TTF2; RAX; CHAF1B; HBP1; GATA1; RNF111; ING4; DLX2; TAF4; ZNF556; SIX5; SOX13; NFATC3; IRF3; ZNF93; HOXA6; LHX1; TRPS1; MKL2; CAMTA2; NAB2; HDAC11; RERE; NPAS1; MEF2D; BANP; POU2F2; ZEB1; PIAS3; BARX1; SIRT7; CALR; ERCC3; NR2F1; EZH1; SOX2; IRF9; ZNF692; PBX1; UBE2L3; PAXBP1; GLI2; NEUROG1; ZSCAN9; NFX1; YAP1; ZKSCAN4; CNOT3; BARX2; CALCOCO1; NFATC4; MYBL2; GLI3; WHSC1; ZNF227; DLX4; ID4; ELF4; SMARCD1; ZNF350; NHLH1; ZNF557; FOXJ2; NRF1; CRYM; TGFB1; ZNF419; HOXA11; KLF7; ETS1; EHMT2; ZNF239; TULP3; MBD1; HOXA1; DACH1; CBFA2T2; SPDEF; LZTR1; KDM5C; FOXK2; ZNF337; SUZ12; KAT2B; ATN1; NFIX; SALL2; ZNF467; HIPK2; MSC; STAT4; TCF7L2; CREB3L2; ARID3B; MED14; TAF5; KAT2A; ESRRG; CHD9; EN1; CITED2; MYCL; ESR1; ZNF432; PBX2; HES1; ZNF510; ZNF235; CBFA2T3; ASCL1; ZNF177; SATB2; EP400; ZNF654; SMARCA1; ZNF133; HOXC13; SCMH1; NR2E1; NFE2; WDR77; ARID5B; KLF11; RING1; RNF6; NCOA6; JUND; PHIP; ZMYND11; ZNF74; SMARCD2; TAL1; TCF21; ZKSCAN3; ZBED2; RBBP8; NFE2L3; OSR2; VPS72; ZNF43; FOXF1; GMNN; GTF2A2; FOXL2; PPP1R13L; ELF3; RFX2; WNT4; SOX9; SIN3B; SOX17; KLF13; ZNF175; CERS4; NKX2-1; SUB1; JUP; ZNF562; ZBTB7A; THAP11; HIC2; FOXJ1; FOSB; NR4A2; ZNF281; TSC22D4; IFI16; CEBPD; RFXANK; ZNF195; RXRA; DLX5; PLAG1; ZNF131; DNMT1; MEIS1; EYA2; NR1H2; PEX14; NAB1; MEF2A; E2F8; TCEA2; KLF6; ZNF232; PSIP1; RHOA; AEBP1; ADRB2; TBX2; IRF4; LMCD1; SMAD1; MEIS2; ERG; STAT6; GATA6; FOXF2; ZNF623; SPEN; ZNF331; ID3; ELK3; HDAC9; ZBTB16; MYB; NR2F2; TRIB3
Down-regulation 230 EZH2; USP22; CCNA2; NR1I2; C1QBP; PCBD1; IKBKAP; CERS6; SREBF1; ATF5; CCDC59; XBP1; MYCBP; CNBP; PQBP1; SAP30; BBX; BTF3; AATF; ENY2; GCM1; TFAM; CBX3; CEBPA; PIR; PTTG1; NFKBIA; RBBP7; MTF2; ZFHX4; MITF; ATF4; SFPQ; NPM1; APEX1; MED6; CRK; SMARCA5; GTF3A; ZNF146; RAN; ZBTB38; TAF9; RBBP5; SMARCE1; ZNF721; HLF; NONO; PDLIM1; DR1; ZBTB20; TRIM16; EDF1; CHD1; YBX3; PSMD9; ETV5; MED4; MTDH; ELF2; FOXO4; C1D; NEDD8; NR1H3; NCOA4; CCNC; ZNF160; CNOT2; ENO1; REPIN1; RBBP4; EGR3; DDX5; ZNF711; RYBP; COPS2; BMI1; NR1H4; ZSCAN12; INSM1; BASP1; DRAP1; GATA4; YBX1; SNIP1; ZBED4; TRIP6; NKX3-1; TBL1XR1; NR1D2; BTG1; ZNF12; TFE3; TRIM28; USF2; FHL2; TAF10; MYC; UBTF; YWHAB; ZNF10; UBE3A; KAT7; KDM5D; ING2; CTNNB1; ZBTB1; RBM14; TSC22D1; RLF; PIAS2; MAGED1; MEOX2; NR0B1; TMF1; TAF11; MED7; ZNF23; ZNF652; MYT1L; ARID4A; DNAJC1; PHF8; RUVBL2; CTR9; MED23; AHR; HMGB2; PROX1; HOXD10; KLF10; ZNF44; MAF; MAX; CREG1; TFDP2; TCF7; DEK; ZNF148; HAND1; TEAD1; PARP1; ZNF165; PATZ1; ISL1; PCGF1; RBPJ; NR2C1; UBE2B; VEZF1; BRD2; CBX4; HOXB7; TP53; CREB5; TFEC; LIMD1; KAT8; BCOR; ZNF611; PBRM1; NFAT5; BRD8; ZNF536; NRIP1; ITGB3BP; EYA1; NR3C2; TWIST1; MED1; MEF2C; HCFC2; ZNF302; TOX; SNW1; IRF8; ELK1; CEBPZ; LPIN2; ZNF292; PUF60; SSX1; CARHSP1; POU2AF1; GABPB1; ZNF410; RNF10; ZNF672; ZNF468; ID2; ETS2; PHOX2B; ZEB2; HTATIP2; FLNA; SALL1; ZNF189; ZNF529; SATB1; HIPK3; DNAJC2; CRY1; SOX10; MAZ; WWC1; HDAC1; HSF2; MED24; TLE1; BHLHE41; TXNIP; ERBB2; TGFB1I1; SIX2; PRKDC; PTRF; CREB3L1; BIRC2; FOSL2; SP100; KAT6B; NRBF2; SCAND1; MSX1; ZFPM2; EMX2; ZBTB18; HOXA5; PPARG; NR2F6