Transcriptional response

Meta Information :

Response ID	Perturbagen	Data accession	Cell Source	Species	Duration	Concentration	Expression ID
RID66182	Trichostatin-a	GSE92742	NPC	Human	24h	10uM	EID0364

Response Information :

Types	Number	Response transcription factors
Up-regulation	135	EGR1; BRD4; HOXD1; FOS; HMG20B; FOSB; LMCD1; CBX7; JUN; ATF3; KLF6; COPS5; IL16; TERF1; ETV5; MYBL1; EHF; ELF3; SNAI2; MLXIP; CREM; FOXO4; ACTL6A; TOB1; ZNF224; ZNF394; NR4A1; CREG1; UBE2B; STAT1; WWP1; CRK; SP100; IRF3; JUND; TRPS1; CRYM; VDR; TFAP2C; ZNF331; ETS1; ZNF91; TAF4B; ERBB4; JUNB; SPDEF; IRF9; MEOX1; TERF2; OSR2; NCOA3; NR4A3; SOX13; PHIP; KLF9; NR1H4; BBX; USP16; MYCL; ETV6; NFATC4; RRN3; NR3C2; TRIM29; ARID5A; EN1; TCEA1; SOX10; CCNH; HLF; CAMTA2; NR4A2; PEG3; SUPT4H1; ZNF304; MITF; MBD2; DNAJC2; ELF5; ANKRD1; PBXIP1; HOXB6; JUP; YWHAB; TTF2; AHR; CALCOCO1; RAD21; TDP2; ZNF665; GMNN; GTF2A2; NR1D2; KLF10; HDAC9; LITAF; TFAP2A; NFE2L3; CCNE1; NR5A2; ARID5B; EMX2; TFCP2L1; HHEX; CEBPB; BHLHE41; SMARCA2; HOXB2; TOX; CD3D; NR1H2; KLF4; RBPMS; DDIT3; TRIB3; MNDA; TULP3; ZSCAN18; WT1; SATB2; ELK3; IRF6; CREBL2; EGR2; SOX9; KLF2; PTRF; TLE2; NFE2; CITED2; NFIB; SOX17; RUNX3; PPARD; ESR1
Down-regulation	267	PUF60; SMARCA4; TP53; SOX11; SOX4; SOX2; GLI2; HMGA2; CARHSP1; ZBED1; ZNF22; JARID2; EYA1; EZH2; PARP1; PCGF2; TCERG1; PATZ1; RBBP4; HMGB3; NFKBIA; ZNF532; DEAF1; PMF1; ENO1; ZNF282; MAGED1; CBX5; TRIM28; DNMT3B; CCNA2; PBX3; DDX5; ZFY; PHF2; YAF2; USF2; BRD3; ARID4B; ZNF292; DNAJC1; NFKB1; POU3F2; MDFI; TCF12; PSPC1; BAZ2B; YBX1; TRIM27; MYCN; TBP; RAN; HDGF; GABPB1; SUV39H1; VGLL4; ASXL1; FOXD1; ZNF302; NRF1; CDK8; CENPF; WIZ; RBM14; ZNF32; SCMH1; PLAGL2; ZBTB1; ZKSCAN7; KDM4A; ZNF783; NCOR1; LHX2; FOXO1; FOXM1; SMARCE1; USP22; ABL1; HMGB1; TCF4; NR2F2; WHSC1; SALL2; LIN28A; ARID4A; RFX5; DPF2; HNRNPD; ID3; ZNF146; SMARCC1; RLF; ERBB2; MXD3; E2F2; ADNP; REPIN1; MMS19; ZBTB14; DDX17; FLNA; TCF3; GTF2IRD1; RREB1; SMARCA5; ETV4; MED16; OLIG2; CTNNB1; KAT7; BRD8; NONO; ZNF629; TBL1XR1; SMARCD1; LPIN2; ZFHX4; SREBF1; GABPA; SSRP1; HEY1; RBM39; BCLAF1; ARNTL2; SMAD6; BASP1; ATF7IP; RBBP7; KDM5B; NCOA4; CHD3; KDM5D; SUPT3H; SALL1; HMGXB4; KAT5; SIAH2; ZNF516; PBRM1; RHOA; BTF3; NCOR2; E2F3; ELK1; CUX2; ZNF177; UBE2I; EHMT2; TGIF2; GTF3A; ZNF189; BCL6; EDF1; ZEB1; RNF141; CTBP1; TFDP2; RFX7; BTG1; NUP62; PAX6; BACH1; HOXD11; CREBZF; MED24; TLE4; BAZ1A; ZNF672; BACH2; RXRA; NRIP1; HIVEP1; SLC2A4RG; KMT2A; HIC2; RSF1; SIX2; SREBF2; TCEB2; DLX2; SFPQ; ZMYND8; TBL1X; MAZ; HDAC2; NAB1; MEIS1; HSBP1; ZMYM2; STAT6; BATF3; ZFP64; TFDP1; TAF1D; FOXF1; MYC; ING3; PQBP1; PTTG1; BRD7; TGFB1I1; HIRA; ELF1; CNOT2; ETV1; CTCF; PITX2; ZFP36L1; VEZF1; RCOR1; KDM2A; NFE2L1; DEK; TSC22D1; SNW1; ZBTB39; ZNF423; CUX1; BMI1; MAF; ZMYND11; TAF9B; ZNF84; PHF20; PCBD1; TRIM32; CHD9; ZEB2; MGA; ZSCAN31; PDLIM1; ASCL1; APEX1; MECOM; TRIM16; FUBP1; SP3; AFF1; HOXA11; HOXC6; AR; PMS1; ZNF24; ATF4; NKX2-1; ID4; NR1H3; MTA1; CBFB; TXNIP; ZIC1; HMGB2; AEBP1; MSX1; ZFP36L2; CDK7; KAT2B; HMGN3; MAFB; LEF1; ISL1; ATF5; LOXL2; ID1; MYB; KAT6B; SMAD3